Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0109 A05 11034 1e-85
RSS2210 A05 19875 2e-80
RSS1963 A05 65821 1e-114
RSS3521 A05 142782 1e-137
RSS2465 A05 153955 1e-82
RSS1772 A05 248526 1e-101
RSS1654 A05 250978 8e-68
RSS2671 A05 291441 1e-105
RSS2650 A05 355517 1e-108
RSS2754 A05 360859 1e-129
RSS3715 A05 500702 1e-55
RSS0554 A05 548881 1e-127
RSS1240 A05 612023 1e-94
RSS3574 A05 618982 1e-117
RSS2895 A05 700182 4e-41
RSS2902 A05 745992 6e-70
RSS0012 A05 776143 1e-52
RSS0894 A05 777442 1e-71
RSS0824 A05 886637 2e-80
RSS1887 A05 889500 2e-43
RSS2284 A05 907314 1e-121
RSS1404 A05 911382 2e-31
RSS0788 A05 924312 1e-100
RSS3913 A05 992085 1e-70
RSS2862 A05 992746 2e-67
RSS0400 A05 1181022 5e-95
RSS3807 A05 1304864 5e-47
RSS3491 A05 1308381 7e-40
RSS1727 A05 1327333 1e-109
RSS0840 A05 1341834 2e-40
RSS3781 A05 1347355 1e-60
RSS1045 A05 1372336 4e-60
RSS2547 A05 1432547 1e-121
RSS2269 A05 1515452 4e-94
RSS0196 A05 1577759 2e-66
RSS2786 A05 1601890 9e-51
RSS3940 A05 1633703 1e-64
RSS2623 A05 1657562 2e-72
RSS1216 A05 1718899 3e-74
RSS2532 A05 1804077 3e-73 LG2 147.2
RSS3661 A05 1814826 7e-77
RSS1754 A05 1823259 3e-45 LG2 147.2
RSS1008 A05 1861321 3e-56
RSS2756 A05 1863280 3e-51 LG2 147.2
RSS1092 A05 1865689 4e-44
RSS3761 A05 1893143 2e-48
RSS1266 A05 1998161 1e-67
RSS3579 A05 1998948 1e-26
RSS3095 A05 2002879 6e-16 LG2 147.2
RSS3812 A05 2100048 4e-98
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus