Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2073 A05 21398854 4e-80
RSS3052 A05 21399460 1e-112
RSS4023 A05 21477467 0.47
RSS0007 A05 21509896 1e-113
RSS0002 A05 21517278 1e-105
RSS1674 A05 21643310 3e-86 LG3 145.8
RSS2040 A05 21697698 1e-103 LG3 17.8
RSS1882 A05 21700874 8e-97
RSS2392 A05 21714140 8e-86
RSS1533 A05 21766304 1e-108
RSS0411 A05 21786725 5e-97
RSS2230 A05 21856063 2e-64
RSS3556 A05 21860815 4e-95
RSS3042 A05 21866359 3e-74
RSS0656 A05 21889591 1e-76
RSS0084 A05 21932276 7e-76 LG3 15.0
RSS1082 A05 21933047 1e-112
RSS2039 A05 21965281 4e-80
RSS1268 A05 22001653 1e-105
RSS2323 A05 22017023 1e-101
RSS2554 A05 22018441 1e-100
RSS2822 A05 22135518 1e-101
RSS2892 A05 22159041 1e-104
RSS1111 A05 22168667 3e-41
RSS3746 A05 22240360 1e-111
RSS3212 A05 22280287 1e-107
RSS3605 A05 22302164 1e-100
RSS2587 A05 22302914 1e-134
RSS2511 A05 22309074 3e-24
RSS0209 A05 22316010 1e-127
RSS1903 A05 22351832 2e-46 LG3 14.1
RSS3916 A05 22434990 1e-118
RSS0063 A05 22522819 1e-104
RSS1818 A05 22525104 9e-68
RSS0113 A05 22540883 8e-98
RSS1242 A05 22588649 1e-103 LG3 13.3
RSS1360 A05 22664629 9e-55
RSS1071 A05 22735297 1e-115
RSS3759 A05 22787322 4e-55
RSS2231 A05 22802473 1e-40
RSS2053 A05 22852601 6e-90
RSS0094 A05 22866945 1e-104
RSS0683 A05 22884761 9e-87
RSS3332 A05 23010805 2e-36
RSS1791 A05 23017247 8e-80
RSS1361 A05 23037408 4e-74 LG3 8.5
RSS3978 A05 23155504 1e-78
RSS3190 A05 23389658 6e-65
RSS3128 A05 23400682 4e-67
RSS0151 A05 23453181 3e-53
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus