Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2485 A05 5768814 7e-94
RSS1934 A05 5808232 2e-33
RSS2159 A05 5855610 9e-74
RSS0942 A05 5860586 6e-97 LG2 134.2
RSS2362 A05 5925430 6e-71 LG2 134.6
RSS1084 A05 5997348 1e-101 LG2 134.2
RSS3570 A05 6000979 1e-88
RSS1112 A05 6000997 4e-83
RSS2868 A05 6133254 2e-68 LG2 132.7
RSS2675 A05 6250881 2e-69 LG8 44.8
RSS0315 A05 6290603 3e-82
RSS1780 A05 6306091 2e-27
RSS0021 A05 6309841 5e-85
RSS1469 A05 6527724 2e-65 LG2 132.1
RSS3122 A05 6531751 1e-104
RSS1400 A05 6533206 9e-83 LG2 133.1
RSS3195 A05 6549734 0.036
RSS1530 A05 6587365 2e-55
RSS1949 A05 6655376 1e-95
RSS1720 A05 6655376 8e-79
RSS1670 A05 6878750 1e-102 LG2 133.4
RSS0429 A05 6968188 7e-35
RSS2498 A05 6968618 1e-123
RSS3777 A05 6972423 2e-19
RSS1821 A05 6984827 2e-24
RSS2484 A05 7033687 3e-36
RSS3512 A05 7144153 2e-55
RSS3901 A05 7226875 1e-114
RSS2731 A05 7277999 1e-47 LG1 107.5
RSS3467 A05 7293558 4e-41
RSS3527 A05 7294095 3e-73
RSS1580 A05 7350237 1e-133
RSS1839 A05 7351075 3e-46
RSS2103 A05 7373555 3e-63
RSS1898 A05 7394189 2e-48
RSS3765 A05 7426674 1e-124
RSS2878 A05 7468725 2e-81
RSS2586 A05 7497076 1e-108 LG2 130.1
RSS0973 A05 7585372 1e-114
RSS1288 A05 7792747 1e-84 LG2 128.3
RSS3734 A05 7812177 5e-85
RSS2963 A05 7963672 1e-118
RSS1843 A05 8105171 1e-86 LG7 14.3
RSS2823 A05 8122030 1e-72
RSS3265 A05 8133297 2e-52
RSS2679 A05 8188152 3e-77 LG3 73.6
RSS0112 A05 8188152 4e-79
RSS2577 A05 8208454 4e-77
RSS0358 A05 8229846 2e-55
RSS0701 A05 8438365 1e-107
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367


MarkerDB | Raphanus sativus