Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0777 A05 2284789 1e-106
RSS1289 A05 2302760 1e-128
RSS0408 A05 2349168 9e-94
RSS0592 A05 2371924 7e-63
RSS1531 A05 2470167 1e-108
RSS0499 A05 2470902 1e-135
RSS0402 A05 2477673 3e-58
RSS1014 A05 2540266 5e-92
RSS0166 A05 2561979 3e-82 LG2 148.6
RSS1577 A05 2616625 1e-111
RSS2189 A05 2775761 1e-128
RSS3153 A05 2856013 3e-50 LG2 141.8
RSS1279 A05 2869949 1e-101
RSS3020 A05 2896496 3e-57
RSS1495 A05 2981288 1e-104
RSS0341 A05 3075101 9e-62 LG4 47.8
RSS3541 A05 3084437 1e-101
RSS0454 A05 3231694 1e-58 LG2 140.6
RSS2395 A05 3241777 1e-107
RSS3993 A05 3324675 1e-103
RSS0252 A05 3394449 1e-91
RSS1317 A05 3400454 2e-61
RSS2071 A05 3406645 1e-69
RSS3568 A05 3496946 6e-73
RSS0998 A05 3622209 7e-99
RSS0674 A05 3625364 1e-89
RSS3215 A05 3685648 3e-43
RSS2371 A05 3775651 2e-39
RSS1236 A05 3867989 8e-38
RSS0699 A05 3873548 1e-132
RSS2624 A05 3873611 2e-83
RSS1193 A05 3909016 3e-30 LG2 139.2
RSS1218 A05 4042197 1e-100
RSS0121 A05 4160687 7e-88
RSS3815 A05 4265194 1e-32
RSS1542 A05 4526621 2e-85
RSS1094 A05 4613936 6e-71
RSS1190 A05 4694012 2e-65 LG2 136.6
RSS1060 A05 4725048 1e-110
RSS3595 A05 5067286 8e-80
RSS3289 A05 5085466 7e-78
RSS3855 A05 5178734 1e-50
RSS3198 A05 5229729 3e-96
RSS4008 A05 5332721 8e-26
RSS0171 A05 5351810 1e-105 LG2 135.4
RSS2758 A05 5367245 2e-36
RSS3216 A05 5368891 1e-21
RSS1429 A05 5409153 3e-83
RSS0539 A05 5653442 6e-96
RSS2468 A05 5662321 6e-49 LG8 41.8
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367


MarkerDB | Raphanus sativus