Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3291 A05 8729160 1e-36
RSS0443 A05 8928140 8e-82
RSS2471 A05 8983790 1e-109
RSS3552 A05 9082572 1e-120
RSS1156 A05 9234297 1e-110
RSS3837 A05 9382732 1e-93
RSS0596 A05 9793321 3e-83 LG8 30.2
RSS2960 A05 9982347 2e-51 LG2 80.8
RSS3876 A05 9982410 2e-83
RSS1862 A05 10018486 2e-72
RSS3087 A05 10143010 6e-34
RSS3400 A05 10358560 8e-08
RSS0230 A05 10422824 1e-107
RSS0714 A05 10437060 1e-101
RSS1696_a A05 10552999 5e-81 LG6 53.2
RSS3903 A05 10565719 2e-80
RSS2660 A05 10622426 2e-88 LG3 107.7
RSS1447 A05 10630404 1e-79
RSS0504 A05 10782861 2e-55
RSS1684 A05 10921462 1e-104
RSS2372 A05 10932018 5e-97
RSS3480 A05 11148449 2e-75
RSS1491 A05 11944831 3e-64
RSS3857 A05 12072451 0.88
RSS2772 A05 12225537 1e-27
RSS2396 A05 12271341 2e-99
RSS2279 A05 12349257 8e-18
RSS3926 A05 12596525 1e-122
RSS2941 A05 12597074 1e-117
RSS3958 A05 12812840 2e-45
RSS0281 A05 12816914 1e-105
RSS2797 A05 13086216 1e-71
RSS3072 A05 13131541 4e-60 LG3 101.7
RSS3599 A05 13166711 1e-130
RSS0772 A05 13336575 2e-96
RSS2560 A05 13353226 4e-09
RSS2691 A05 13458853 1e-110
RSS3902 A05 13662546 1e-107
RSS0025 A05 14129829 1e-61
RSS0519 A05 14475581 1e-105
RSS1897 A05 14572865 1e-127
RSS0621 A05 14779404 3e-54
RSS0626 A05 14779404 2e-39
RSS2567 A05 14876411 4e-95
RSS0222 A05 14892962 1e-113
RSS0736 A05 15533854 1e-130
RSS2080 A05 15534753 2e-59 LG3 43.5
RSS1039 A05 15538344 4e-74
RSS0617 A05 15667502 6e-60
RSS2173 A05 15722437 5e-14
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus