Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2094 A05 15737385 4e-62 LG9 42.9
RSS3436 A05 15763099 3e-83
RSS2573 A05 15766873 5e-82
RSS3596 A05 15777371 0.047
RSS2962 A05 15812859 1e-90
RSS3952 A05 15831173 2e-85
RSS0242 A05 15832797 3e-83
RSS0835 A05 16089702 3e-87 LG3 42.4
RSS1527 A05 16259325 1e-108
RSS3453 A05 16265276 6e-89 LG3 47.1
RSS1657 A05 16470274 1e-97 LG3 41.3
RSS0238 A05 16752151 1e-115
RSS0799 A05 16752151 1e-103 LG3 41.0
RSS0582 A05 16861826 1e-145
RSS3119 A05 16866082 2e-98
RSS0169 A05 16904163 1e-102
RSS2975 A05 16997954 2e-92
RSS3827 A05 17083595 2e-27 LG8 13.8
RSS3980 A05 17110343 5e-67
RSS1437 A05 17207954 4e-56 LG3 40.4
RSS4015 A05 17215661 1e-129
RSS0581 A05 17243847 6e-62
RSS3139 A05 17243847 3e-49
RSS2486 A05 17273101 1e-99
RSS3551 A05 17424374 3e-75
RSS0273 A05 17426599 4e-60
RSS3797 A05 17455022 1e-107
RSS0431 A05 17455022 1e-120
RSS1817 A05 17483741 9e-98
RSS0585 A05 17700634 8e-79
RSS1610 A05 17706863 2e-66 LG3 37.3
RSS3126 A05 17893833 6e-62
RSS2418 A05 17961473 7e-83
RSS2482 A05 18008846 6e-47
RSS1342 A05 18013917 5e-93
RSS2240 A05 18019179 2e-34
RSS3878 A05 18196423 1e-115 LG3 36.4
RSS0865 A05 18282063 1e-111
RSS1539 A05 18310531 5e-67
RSS2461 A05 18312950 5e-52 LG3 36.4
RSS3562 A05 18324992 1e-73 LG3 36.2
RSS1591 A05 18394634 1e-126
RSS0794 A05 18422242 1e-88 LG3 33.8
RSS2938 A05 18443732 1e-100
RSS2379 A05 18672338 1e-101
RSS2346 A05 18684962 2e-83
RSS0491 A05 18805073 5e-78 LG3 35.4
RSS1815 A05 18808132 1e-67
RSS1598 A05 18829900 4e-83
RSS2365 A05 18859158 2e-14
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus