Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0012 Chr03 36189006 3e-97
CaES4447 Chr03 36382580 1e-121
CaES5272 Chr03 36466060 9e-96
CaES1307 Chr03 36547297 9e-70
CaES0376 Chr03 36552288 1e-46
CaES3546 Chr03 36553123 1e-54
CaES0455 Chr03 38523066 1e-108
CaES5093 Chr03 38563964 1e-137
CaES4525 Chr03 38566450 1e-150
CaES1731 Chr03 38567182 9e-80
CaES4247 Chr03 38586103 1e-102
CaES2451 Chr03 38591297 1e-59
CaES2660 Chr03 38848601 1e-137
CaES5347 Chr03 39063758 8e-31
CaES0724 Chr03 39108043 1e-142
CaES1439 Chr03 39146023 1e-141
CaES4177 Chr03 39146023 1e-101
CaES4733 Chr03 39149397 1e-130
CaES1502 Chr03 39178304 2e-66
CaES0579 Chr03 39477304 3e-61
CaES3929 Chr03 39531838 1e-35
CaES4149 Chr03 39902625 1e-101
CaES1331 Chr03 40000536 1e-104
CaES0404 0.321 190 Chr03 40604139 1e-107
CaES0104 Chr03 40656417 2e-79
CaES0749 Chr03 40884494 1e-160
CaES5273 Chr03 41359213 4e-75
CaES4050 Chr03 41361540 6e-33
CaES0730 Chr03 41444509 1e-116
CaES3931 Chr03 41498742 1e-141
CaES3037 Chr03 41827755 1e-133
CaES4061 Chr03 41836357 1e-120
CaES1843 Chr03 42401537 1e-144
CaES0363 Chr03 43428548 4e-94
CaES0431 Chr03 43731979 1e-121
CaES0469 Chr03 44184186 1e-169
CaES5625 Chr03 44752022 1e-103
CaES0389 Chr03 45541389 1e-137
CaES0114 Chr03 45693585 6e-87
CaES5663 Chr03 47068422 1e-112
CaES3022 Chr03 47147261 4e-97
CaES0306 Chr03 47147845 8e-83
CaES4930 Chr03 47684375 1e-135
CaES1416 Chr03 47835281 1e-105
CaES1998 Chr03 48359277 1e-138
CaES5573 Chr03 48915515 1e-104
CaES3892 Chr03 49004993 1e-81
CaES2442 Chr03 49568732 7e-98
CaES3039 Chr03 49832669 7e-59
CaES2823 Chr03 50737045 3e-73
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651


MarkerDB | Capsicum annuum