Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3632 Chr03 237997367 1e-126
CaES0072 Chr03 238412268 3e-92
CaES4460 Chr03 238562571 1e-143
CaES4688 Chr03 238853433 1e-66
CaES4420 Chr03 238922969 1e-131
CaES4377 Chr03 238932584 1e-112
CaES3600 Chr03 239084205 1e-126
CaES4869 Chr03 239726621 1e-116
CaES3776 Chr03 240774900 7e-80
CaES2471 Chr03 241605466 6e-68
CaES5544 Chr03 241613550 1e-124
CaES5450 Chr03 241780913 8e-91
CaES0710 Chr03 241827273 1e-115
CaES5734 Chr03 241829455 4e-76
CaES3971 Chr03 241924826 1e-117
CaES5628 Chr03 241968927 1e-147
CaES3011 Chr03 242534621 1e-124
CaES2419 Chr03 242764412 1e-108
CaES2308 Chr03 243862309 1e-105
CaES2457 Chr03 243880960 4e-57
CaES4977 Chr03 243942740 5e-80
CaES5706 Chr03 244041105 2e-82
CaES5158 Chr03 244316926 2e-98
CaES4651 Chr03 244532731 1e-146
CaES5306 Chr03 244543015 1e-88
CaES4069 Chr03 244863376 2e-84
CaES3565 Chr03 245067504 1e-168
CaES2038 Chr03 245067747 1e-106
CaES0423 Chr03 245072501 1e-150
CaES3885 Chr03 245453977 5e-97
CaES3537 Chr03 245559026 3e-58
CaES4526 Chr03 245652678 1e-81
CaES2927 Chr03 245716273 1e-141
CaES5397 Chr03 246006323 1e-118
CaES4306 Chr03 246105407 1e-143
CaES1030 Chr03 246237577 1e-114
CaES2466 Chr03 246364630 4e-81
CaES0573 Chr03 246541583 2e-25
CaES3856 0.0 78 Chr03 246550299 1e-134
CaES1475 Chr03 246733836 2e-85
CaES5147 Chr03 246734143 5e-45
CaES0011 Chr03 246870485 6e-57
CaES1533 Chr03 247168894 2e-69
CaES4494 Chr03 247170178 3e-89
CaES2292 Chr03 247185921 1e-133
CaES1876 Chr03 247430571 2e-82
CaES3820 Chr03 247431367 1e-143
CaES5146 Chr03 247977557 1e-95
CaES3799 Chr03 248146101 3e-46
CaES0215 Chr03 248149625 4e-78
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum