Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5035 Chr03 226053265 1e-141
CaES1464 Chr03 226399968 2e-87
CaES0424 Chr03 226404380 6e-86
CaES0826 Chr03 226476755 3e-71
CaES4614 Chr03 227101642 1e-115
CaES5391 Chr03 227101744 1e-67
CaES3083 Chr03 228108225 1e-112
CaES3867 Chr03 228694693 1e-144
CaES3818 Chr03 228695872 1e-116
CaES4427 Chr03 228735742 1e-118
CaES1471 Chr03 229466036 7e-99
CaES0369 Chr03 229469175 5e-97
CaES0517 Chr03 229470907 8e-57
CaES4636 Chr03 229658366 1e-143
CaES1497 Chr03 229801086 4e-92
CaES1196 Chr03 230390011 1e-119
CaES2006 Chr03 230391531 2e-51
CaES0059 Chr03 230657327 3e-50
CaES4791 Chr03 231378276 1e-115
CaES1999 Chr03 231830901 1e-103
CaES1946 Chr03 231901990 2e-91
CaES1963 Chr03 232351417 5e-92
CaES0255 Chr03 232351640 5e-66
CaES4558 Chr03 232541050 1e-122
CaES2134 Chr03 232576028 1e-144
CaES5000 Chr03 232740914 1e-108
CaES3777 Chr03 232878744 1e-154
CaES1234 Chr03 232880123 1e-137
CaES2199 Chr03 233027777 3e-82
CaES1171 Chr03 233087438 1e-159
CaES1878 Chr03 233188012 3e-45
CaES1812 Chr03 233267185 1e-113
CaES1543 Chr03 233310101 7e-87
CaES2101 Chr03 233310527 1e-110
CaES1513 Chr03 233567860 2e-47
CaES4282 Chr03 233632795 3e-93
CaES4369 Chr03 233702742 1e-137
CaES0191 Chr03 233706699 1e-147
CaES2618 Chr03 233783314 1e-117
CaES5746 Chr03 233827296 6e-77
CaES0785 Chr03 233912615 1e-79
CaES0385 Chr03 234377433 4e-91
CaES1186 Chr03 234382646 1e-101
CaES0370 Chr03 234664295 1e-136
CaES4674 Chr03 235410320 1e-139
CaES2733 Chr03 236034103 7e-93
CaES5094 Chr03 236116676 1e-140
CaES1875 Chr03 236779379 3e-29
CaES3414 Chr03 237430871 1e-138
CaES2687 Chr03 237964155 1e-141
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum