Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4782 Chr03 180624481 1e-63
CaES4474 Chr03 183595099 2e-85
CaES0023 Chr03 189776849 9e-51
CaES4967 Chr03 194127954 1e-139
CaES4984 Chr03 195225001 1e-114
CaES3113 Chr03 195446849 1e-126
CaES5737 Chr03 195468834 1e-125
CaES4699 Chr03 195902421 1e-42
CaES1073 Chr03 196205240 1e-111
CaES4359 Chr03 196210172 4e-77
CaES1119 Chr03 196225758 1e-54
CaES1603 Chr03 196398391 1e-110
CaES3522 Chr03 196398933 1e-112
CaES3874 Chr03 201155789 1e-130
CaES4702 Chr03 203601144 5e-95
CaES1563 Chr03 204183045 2e-42
CaES0544 Chr03 207387769 1e-92
CaES1457 Chr03 207810928 1e-121
CaES1593 Chr03 207989408 1e-106
CaES4096 Chr03 209701849 4e-34
CaES4831 Chr03 210082272 1e-161
CaES3084 Chr03 210141784 1e-146
CaES3225 Chr03 210459612 4e-81
CaES4170 Chr03 211324618 1e-116
CaES5333 Chr03 211728730 1e-118
CaES0173 Chr03 212594050 1e-106
CaES4703 Chr03 212598033 1e-123
CaES5178 0.306 172 Chr03 214053229 1e-125
CaES5583 Chr03 214550271 3e-74
CaES5411 Chr03 214568027 2e-84
CaES2363 Chr03 216447139 1e-121
CaES0802 Chr03 217398177 1e-100
CaES3391 Chr03 217767091 1e-102
CaES4156 Chr03 218699285 1e-125
CaES0868 Chr03 219942240 2e-89
CaES3102 Chr03 222079276 1e-142
CaES2803 Chr03 222731414 1e-106
CaES3566 Chr03 222734793 1e-103
CaES3287 Chr03 222735025 2e-58
CaES3398 Chr03 222735735 1e-102
CaES1710 Chr03 222736525 1e-126
CaES3081 Chr03 222794011 1e-109
CaES4919 Chr03 222834147 2e-80
CaES1804 Chr03 223216978 1e-68
CaES0384 Chr03 223813383 5e-80
CaES4327 Chr03 224076617 8e-85
CaES3036 Chr03 224117329 1e-149
CaES1526 Chr03 224350369 1e-115
CaES4409 Chr03 225487518 1e-144
CaES0028 Chr03 225689992 2e-61
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum