Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0881 A07 36044 4e-37 LG2 5.0
RSS1019 A07 63699 2e-55
RSS1106 A07 64231 3e-61 LG2 3.5
RSS2993 A07 101507 1e-117
RSS3378 A07 288285 0.013 LG9 7.3
RSS2896 A07 491752 7e-67
RSS1700 A07 491752 1e-68
RSS0502 A07 548480 4e-23
RSS3611 A07 916711 9e-39
RSS2217 A07 1018815 1e-79 LG2 67.2
RSS3514 A07 1091157 5e-74
RSS0009 A07 1519440 1e-123
RSS0299 A07 1540555 8e-80
RSS2657 A07 1540555 1e-105 LG2 62.8
RSS3375 A07 1584159 1e-113
RSS3009 A07 1590183 1e-112
RSS4018 A07 1621173 1e-118
RSS0082 A07 1692373 5e-75
RSS2925 A07 2370174 2e-61
RSS3074 A07 2748140 1e-81
RSS2527 A07 3023863 2e-85
RSS1795 A07 3263965 5e-72 LG3 130.0
RSS1176 A07 3263970 6e-89
RSS1327 A07 3264070 4e-73
RSS1146 A07 3590450 2e-91 LG3 53.0
RSS2803 A07 3826041 8e-74
RSS2008 A07 3854563 1e-90 LG3 51.0
RSS1085 A07 3918130 1e-133
RSS2886 A07 3918357 2e-68
RSS0469 A07 3918751 1.7
RSS2598 A07 4281468 8e-96
RSS1284 A07 4344205 3e-17 LG4 60.4
RSS3917 A07 4517262 1e-171
RSS0163 A07 4518560 1e-79
RSS0039 A07 4543563 1e-106
RSS0074 A07 4678982 3e-23
RSS1567 A07 4679651 3e-69
RSS3985 A07 5131410 1e-46
RSS2194 A07 5229328 3e-13
RSS0152 A07 5365960 4e-84
RSS1962 A07 5763852 1e-110
RSS1946 A07 5768795 1e-116
RSS3360 A07 6641320 1e-65
RSS1550 A07 6825878 9e-72
RSS2768 A07 7032481 1e-14
RSS3157 A07 7057422 1e-37
RSS1765 A07 7079107 1e-116
RSS3708 A07 7266155 2e-95
RSS0206 A07 7266161 1e-127
RSS2549 A07 7351035 2e-62
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362

MarkerDB | Raphanus sativus