Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2479 A07 15237622 4e-69
RSS1936 A07 15317627 1e-104
RSS1362 A07 15323664 6e-74
RSS2526 A07 15446037 3e-32
RSS3494 A07 15574023 1e-138
RSS1833 A07 15656385 8e-99
RSS0694 A07 15799185 1e-119
RSS3015 A07 15981801 2e-17 LG3 147.9
RSS3391 A07 16114982 2e-15
RSS2791 A07 16131566 1e-108
RSS2825 A07 16192219 1e-133
RSS1172 A07 16247561 5e-84
RSS1032 A07 16305602 4e-15 LG5 120.5
RSS3695 A07 16449665 4e-74
RSS2181 A07 16449851 2e-48
RSS0838 A07 16541226 1e-129
RSS2017 A07 16561777 1e-24
RSS3713 A07 16618010 2e-50
RSS1771 A07 16625481 1e-134
RSS3990 A07 16644334 4e-68
RSS2582 A07 16667604 1e-36
RSS0825 A07 16753278 1e-122
RSS1562 A07 16769628 2e-05
RSS1403 A07 16790096 0.069
RSS2305 A07 16814116 1e-97
RSS1214 A07 16880789 2e-33
RSS0190 A07 16908235 2e-91
RSS0553 A07 16976841 3e-91 LG1 54.4
RSS1324 A07 16977778 8e-89
RSS3883 A07 16979350 2e-45
RSS1277 A07 16979557 5e-82
RSS2711 A07 16981485 8e-90
RSS2079 A07 17063201 2e-48 LG4 64.2
RSS0291 A07 17070355 1e-87 LG1 56.2
RSS0532 A07 17084604 2e-36
RSS3510 A07 17086020 1e-138
RSS2333 A07 17125309 3e-87
RSS1055 A07 17126865 4e-33
RSS3624 A07 17171457 8e-82
RSS2473 A07 17343148 1e-35
RSS2958 A07 17423374 8e-95 LG5 21.2
RSS0410 A07 17423609 2e-57
RSS2801 A07 17427897 1e-109
RSS2869 A07 17435613 6e-61
RSS0470 A07 17478625 1.4
RSS1498 A07 17487517 1e-118
RSS3057 A07 17604325 1e-125
RSS1966 A07 17645053 1e-107
RSS3567 A07 17690066 0.035
RSS2839 A07 17725622 7e-04
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362


MarkerDB | Raphanus sativus