Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0321 A07 17774237 1e-117
RSS0892 A07 17783944 5e-82
RSS3033 A07 17801089 2e-29
RSS3093 A07 17894424 1e-140
RSS0691 A07 17942149 1e-126
RSS1602 A07 17993089 6e-96
RSS3317 A07 18026735 2e-88
RSS4024 A07 18049879 5e-07
RSS3135 A07 18235779 1e-143
RSS1369 A07 18270863 1e-52 LG6 19.4
RSS2120 A07 18361164 2e-92
RSS2816 A07 18363316 1e-116
RSS1177 A07 18471165 1e-57 LG6 20.8
RSS1182 A07 18511219 2e-98
RSS3920 A07 18627475 1e-114
RSS0536 A07 18721974 2e-95
RSS4000 A07 18727683 1e-133
RSS3210 A07 18743716 4e-95
RSS3729 A07 18781501 2e-10 LG1 17.8
RSS3684 A07 18829685 1e-115
RSS0127 A07 18911137 7e-90
RSS1481 A07 18914160 1e-113
RSS3821 A07 18977766 8e-92 LG6 23.5
RSS1370 A07 18993542 1e-89
RSS1535 A07 19048936 1e-116
RSS1483 A07 19060992 1e-83
RSS3315 A07 19119194 8e-76
RSS0886 A07 19169222 1e-101
RSS2767 A07 19169222 2e-95
RSS1253 A07 19223008 1e-119
RSS0019 A07 19259081 1e-101
RSS3384 A07 19300968 1e-88
RSS1302 A07 19319180 1e-83
RSS3672 A07 19390140 0.59
RSS2971 A07 19438908 1e-123
RSS3835 A07 19459999 1e-99 LG6 29.7
RSS1513 A07 19462904 2e-98 LG6 28.3
RSS0528 A07 19478800 8e-61
RSS0994 A07 19483218 6e-83
RSS1942 A07 19506940 4e-93
RSS3259 A07 19580147 3e-85
RSS3687 A07 19600528 3e-86
RSS1465 A07 19602659 1e-101
RSS3703 A07 19736239 1e-115
RSS0638 A07 19752723 7e-77
RSS1189 A07 19752905 1e-113
RSS2908 A07 19807794 1e-30
RSS0475 A07 19907903 4e-95 LG6 31.6
RSS4031 A07 20010608 1e-103
RSS4026 A07 20085606 1e-66
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362


MarkerDB | Raphanus sativus