Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
13200_233 SL2.40ch05 6571646 0.0 ch05 22.552 ch05 25.371
TES5043 SL2.40ch05 6571647 0.0
TGS4371 SL2.40ch05 6576759 0.0
TGS4312 SL2.40ch05 6662475 0.0
TES7186 SL2.40ch05 6691149 0.0
TES3812 SL2.40ch05 6725732 0.0
16080_358 SL2.40ch05 6839617 1e-180
16080_584 SL2.40ch05 6839617 1e-180
TGS9832 SL2.40ch05 6847458 0.0
TES5620 SL2.40ch05 6848515 0.0
5890_1201 SL2.40ch05 6848870 0.0
5890_630 SL2.40ch05 6848870 0.0 ch05 26.846 ch05 27.15
TES7294 SL2.40ch05 6849645 1e-154
1504_282 SL2.40ch05 6934300 0.0 ch05 29.138 ch05 27.558
1504_365 SL2.40ch05 6934300 0.0
TGS8594 SL2.40ch05 6936260 0.0
18191_196 SL2.40ch05 6944423 0.0 ch05 29.604 ch05 27.59
TES1354 SL2.40ch05 6944455 0.0 ch05 29.601
TGS5963 SL2.40ch05 6956067 0.0
10005_1066 SL2.40ch05 6959525 1e-127
2276_805 SL2.40ch05 6986130 0.0 ch05 31.266 ch05 27.999
TES6995 SL2.40ch05 6988694 1e-179
5102_1247 SL2.40ch05 7004089 0.0
5102_496 SL2.40ch05 7004089 0.0
TES6382 SL2.40ch05 7004095 0.0
21703_309 SL2.40ch05 7013390 0.0 ch05 31.266 ch05 28.48
4894_1294 SL2.40ch05 7023738 1e-146
TES0794 SL2.40ch05 7031541 0.0
5578_297 SL2.40ch05 7051692 0.0 ch05 32.345 ch05 28.404
5578_494 SL2.40ch05 7051692 0.0
9599_1443 SL2.40ch05 7059122 0.0 ch05 32.345 ch05 28.404
9599_1476 SL2.40ch05 7059122 0.0
12080_1090 SL2.40ch05 7066238 0.0 ch05 32.345 ch05 28.47
TES3669 SL2.40ch05 7093778 0.0
TES6087 SL2.40ch05 7095471 0.0
TGS4341 SL2.40ch05 7097740 0.0
TES3756 SL2.40ch05 7116798 1e-143
TGS11511 SL2.40ch05 7198182 0.0
TGS7619 SL2.40ch05 7198187 0.0
TGS7481 SL2.40ch05 7198221 0.0
TGS5393 SL2.40ch05 7222613 0.0
TGS11540 SL2.40ch05 7222693 0.0
TGS8183 SL2.40ch05 7315935 0.0
8525_138 SL2.40ch05 7352456 1e-178
8525_214 SL2.40ch05 7352456 1e-178
15586_494 SL2.40ch05 7411354 0.0
TGS2280 SL2.40ch05 7478746 0.0
6576_179 SL2.40ch05 7494865 0.0 ch05 34.957 ch05 30.213
6576_431 SL2.40ch05 7494865 0.0
6576_503 SL2.40ch05 7494865 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum