Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
T40 SL2.40ch05 7498863 4e-87 ch05 77.968
TEI0063 SL2.40ch05 7503250 0.0 ch05 81.616 ch05 34.911
TES4896 SL2.40ch05 7503897 0.0
TGS13011 SL2.40ch05 7504179 0.0
TGS0141 SL2.40ch05 7508096 0.0
TGS4281 SL2.40ch05 7523504 0.0
TES0188 SL2.40ch05 7535129 0.0 ch05 81.945 ch05 34.667
4441_1537 SL2.40ch05 7616734 0.0
4441_209 SL2.40ch05 7616734 0.0 ch05 34.957 ch05 30.542
TES2994 SL2.40ch05 7621658 0.0
TGS4003 SL2.40ch05 7782128 0.0
TGS13453 SL2.40ch05 7793730 0.0
7166_427 SL2.40ch05 7818051 0.0 ch05 34.957 ch05 30.662
TES0192 SL2.40ch05 7827343 0.0
TGS1575 SL2.40ch05 7829044 0.0
15248_133 SL2.40ch05 7897371 1e-133
15248_181 SL2.40ch05 7897371 1e-133
15248_230 SL2.40ch05 7897371 1e-133
15248_420 SL2.40ch05 7897371 1e-133
TGS2577 SL2.40ch05 7900086 0.0
TGS12142 SL2.40ch05 7904298 0.0
TGS8241 SL2.40ch05 8006741 0.0
TES5897 SL2.40ch05 8046335 1e-169
TES2191 SL2.40ch05 8053938 0.0
TES1931 SL2.40ch05 8072516 0.0
TES6214 SL2.40ch05 8073707 0.0
TES3072 SL2.40ch05 8157345 0.0
TGS2526 SL2.40ch05 8168859 0.0
TGS0813 SL2.40ch05 8176087 0.0
TES0145 SL2.40ch05 8176541 0.0 ch05 85.619
7551_525 SL2.40ch05 8176565 0.0 ch05 31.373
TGS5199 SL2.40ch05 8205884 0.0
TES5484 SL2.40ch05 8248735 0.0
7868_404 SL2.40ch05 8248735 0.0
7868_611 SL2.40ch05 8248735 0.0
7868_635 SL2.40ch05 8248735 0.0
7868_664 SL2.40ch05 8248735 0.0
7868_686 SL2.40ch05 8248735 0.0
7868_701 SL2.40ch05 8248735 0.0
TGS10049 SL2.40ch05 8265430 0.0
TGS9829 SL2.40ch05 8294836 0.0
174_299 SL2.40ch05 8323297 1e-109
TES3821 SL2.40ch05 8367693 0.0
TES2852 SL2.40ch05 8368770 0.0
TES5326 SL2.40ch05 8398947 3e-83
TGS8247 SL2.40ch05 8538964 0.0
TGS10211 SL2.40ch05 8539378 0.0
TGS2439 SL2.40ch05 8543309 0.0 ch05 49.349
TGS5577 SL2.40ch05 8649562 0.0
TES3725 SL2.40ch05 8649572 1e-166
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum