Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES6922 SL2.40ch12 5869412 0.0
2157_859 SL2.40ch12 5869839 0.0
TES7153 SL2.40ch12 5869839 0.0
2855_640 SL2.40ch12 5904739 0.0
2855_661 SL2.40ch12 5904739 0.0
TES3113 SL2.40ch12 5904762 0.0
TGS3162 SL2.40ch12 5934722 0.0
TGS7635 SL2.40ch12 5934807 0.0
TGS11073 SL2.40ch12 5939973 0.0
TGS12519 SL2.40ch12 5952447 0.0
TGS4246 SL2.40ch12 5952526 0.0
TGS11558 SL2.40ch12 5958119 0.0
TGS13173 SL2.40ch12 5981994 0.0
TGS2657 SL2.40ch12 6047910 0.0
TGS0244 SL2.40ch12 6071086 0.0 ch12 40.4
TGS9055 SL2.40ch12 6073493 0.0
TGS2914 SL2.40ch12 6089336 0.0
TGS9807 SL2.40ch12 6160167 0.0
TGS10916 SL2.40ch12 6170086 0.0
TGS3821 SL2.40ch12 6200440 0.0
TGS4265 SL2.40ch12 6215736 0.0
TGS11777 SL2.40ch12 6215962 0.0
TGS8532 SL2.40ch12 6247150 0.0
TGS7722 SL2.40ch12 6257728 0.0
TES2969 SL2.40ch12 6324876 0.0
TES0471 SL2.40ch12 6355464 1e-154 ch12 55.7 ch12 74.093
TGS10027 SL2.40ch12 6402294 0.0
TEI0815 SL2.40ch12 6426783 0.0 ch12 58.407
TES3960 SL2.40ch12 6426880 0.0
8231_398 SL2.40ch12 6437354 0.0
8231_485 SL2.40ch12 6437354 0.0 ch12 74.093
TES3746 SL2.40ch12 6437419 0.0
TGS3160 SL2.40ch12 6458706 0.0
TES1779 SL2.40ch12 6459047 0.0 ch12 56.872
TES5268 SL2.40ch12 6495984 0.0
TGS9396 SL2.40ch12 6572515 0.0
TGS2160 SL2.40ch12 6624719 0.0
TGS2229 SL2.40ch12 6625581 0.0
TGS8051 SL2.40ch12 6640036 0.0
9948_641 SL2.40ch12 6663482 1e-117
TGS5594 SL2.40ch12 6666898 0.0
TES4784 SL2.40ch12 6680609 1e-137
TES6649 SL2.40ch12 6688846 0.0
TES6067 SL2.40ch12 6713524 0.0
TGS8242 SL2.40ch12 6736240 0.0
TGS0247 SL2.40ch12 6736240 0.0
TGS7529 SL2.40ch12 6737454 0.0
9861_494 SL2.40ch12 6763305 0.0
TES1323 SL2.40ch12 6776432 0.0
14655_272 SL2.40ch12 6776464 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum