Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch11

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1899


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TEI0001 SL2.40ch11 8090321 0.0 ch11 68.349
TES1060 SL2.40ch11 6320098 0.0 ch11 68.719
TGS0606 SL2.40ch11 5563490 0.0 ch11 68.959
tmb0046 SL2.40ch11 5928316 0.0 ch11 68.981
TGS0285 SL2.40ch11 13429193 0.0 ch11 69.37 ch11 57.036
TGS0187 SL2.40ch11 24491875 0.0 ch11 69.611 ch11 57.403
TGS1887 SL2.40ch11 47567060 0.0 ch11 69.93
TG47 SL2.40ch11 35800591 0.0 ch11 70.203
TEI0209 SL2.40ch11 47479344 0.0 ch11 70.776
TGS0973 SL2.40ch11 36074638 1e-139 ch11 71.097
TGS2769 SL2.40ch11 6491608 0.0 ch11 71.504
TGS0522 SL2.40ch11 13859171 0.0 ch11 72.055 ch11 57.08
TGS3464 SL2.40ch11 22207355 0.0 ch11 72.638
TES1449 SL2.40ch11 47898870 0.0 ch11 73.379
TES0124 SL2.40ch11 48644473 0.0 ch11 73.694
TES0095 SL2.40ch11 48235974 0.0 ch11 74.032
cTOE-14-L16 SL2.40ch11 48882490 1e-145 ch11 74.792
TGS0991 SL2.40ch11 39704660 0.0 ch11 75.328
TES0899 SL2.40ch11 49221826 0.0 ch11 76.816
TEI0699 SL2.40ch11 49288282 0.0 ch11 76.839
TES1108 SL2.40ch11 49284814 0.0 ch11 77.157
T1787 SL2.40ch11 49360597 3e-97 ch11 77.525
T1071 SL2.40ch11 49446274 0.0 ch11 77.547
C2_At4g01560 SL2.40ch11 49092594 0.0 ch11 78.039
T1648 SL2.40ch11 49084730 1e-127 ch11 78.405
C2_At3g44880 SL2.40ch11 49288206 0.0 ch11 79.197
TGS1476 SL2.40ch11 29854252 0.0 ch11 80.134 ch11 57.14
TES1000 SL2.40ch11 49267694 0.0 ch11 81.054
TES0006 SL2.40ch11 49758748 1e-135 ch11 81.635 ch11 73.095
T1014 SL2.40ch11 49863941 1e-102 ch11 83.063
TES1912 SL2.40ch11 49912379 0.0 ch11 83.991
TES0727 SL2.40ch11 49811888 1e-128 ch11 85.374
TES1667 SL2.40ch11 50267579 0.0 ch11 89.94
cLET-10-O11 SL2.40ch11 50501250 1e-138 ch11 91.259
TG46 SL2.40ch11 50366212 0.0 ch11 91.281
TES0813 SL2.40ch11 50588094 0.0 ch11 93.3
TEI0069 SL2.40ch11 50834611 0.0 ch11 94.553
TES0713 SL2.40ch11 50587995 0.0 ch11 97.819
TEI0795 SL2.40ch11 51392630 0.0 ch11 100.869
TEI0360 SL2.40ch11 51502740 0.0 ch11 101.434 ch11 99.215
TG36 SL2.40ch11 51493288 0.0 ch11 102.474
TGS1262 SL2.40ch11 52271803 0.0 ch11 104.769
TES0701 SL2.40ch11 52180555 1e-123 ch11 106.415
TES0478 SL2.40ch11 52292662 0.0 ch11 107.091
TGS0830 SL2.40ch11 52252891 0.0 ch11 110.222 ch11 106.272
TES0344 SL2.40ch11 51420278 0.0 ch11 112.81 ch11 96.085
TES1695 SL2.40ch11 52453769 0.0 ch11 117.017 ch11 108.762
TGS0346 SL2.40ch11 53085662 0.0 ch11 119.986 ch11 116.761
TG393 SL2.40ch11 53249496 0.0 ch11 122.288
TGS9386 SL2.40ch11 34615 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1899


MarkerDB | Solanum lycopersicum