Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2653 Chr00 513924576 9e-53
CaES5066 Chr00 517013848 1e-62
CaES5620 Chr00 522421368 4e-97
CaES2902 Chr00 522421567 1e-113
CaES1351 Chr00 522616044 1e-132
CaES0895 Chr00 522833593 1e-102
CaES1792 Chr00 522965527 7e-32
CaES4784 Chr00 523069572 1e-115
CaES2045 Chr00 523534450 1e-103
CaES0265 Chr00 524702919 4e-40
CaES1926 Chr00 524838172 1e-113
CaES4656 Chr00 525069243 1e-115
CaES0366 Chr00 525070762 1e-102
CaES2289 Chr00 525104465 1e-48
CaES1048 Chr00 525150290 2e-60
CaES4679 Chr00 525344673 2e-65
CaES4739 Chr00 525344673 7e-40
CaES2121 Chr00 525532230 1e-74
CaES1805 Chr00 525567594 1e-105
CaES3161 Chr00 526801523 8e-97
CaES3372 Chr00 526846652 1e-136
CaES0030 Chr00 527101080 1e-82
CaES2783 Chr00 527183808 2e-72
CaES3168 Chr00 527248279 2e-94
CaES0547 Chr00 530343103 5e-87
CaES0417 Chr00 530418212 1e-124
CaES4621 Chr00 532759396 1e-124
CaES2847 Chr00 533826483 1e-114
CaES5118 Chr00 534885007 4e-94
CaES5488 Chr00 535139680 2e-53
CaES0983 Chr00 536161253 1e-145
CaES0600 Chr00 536495288 1e-111
CaES2747 Chr00 536807189 1e-113
CaES0466 Chr00 538409186 1e-126
CaES2498 Chr00 538650859 4e-95
CaES3749 Chr00 538762230 1e-125
CaES1835 Chr00 538763069 1e-115
CaES4950 Chr00 538786557 1e-124
CaES5080 Chr00 538795506 3e-50
CaES5571 Chr00 538805952 4e-58
CaES2095 Chr00 538813972 5e-66
CaES1304 Chr00 539000789 2e-82
CaES2427 Chr00 539115268 1e-106
CaES0354 Chr00 539117709 2e-50
CaES2383 Chr00 539148749 3e-73
CaES1983 Chr00 542314354 1e-149
CaES2831 Chr00 544244733 4e-86
CaES0049 Chr00 544464356 3e-92
CaES0673 Chr00 544715232 1e-107
CaES0739 Chr00 544772793 1e-131
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604


MarkerDB | Capsicum annuum