Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1250 Chr00 582496761 1e-119
CaES1500 Chr00 582496942 9e-78
CaES1989 Chr00 584022378 1e-77
CaES2617 Chr00 584134271 1e-114
CaES1984 Chr00 584447423 1e-119
CaES1053 Chr00 586637738 2e-91
CaES2064 Chr00 587569428 3e-92
CaES4879 Chr00 587762898 1e-129
CaES2944 Chr00 589185776 1e-123
CaES3925 Chr00 591638260 1e-139
CaES2913 Chr00 592380632 1e-148
CaES3139 Chr00 593084595 1e-135
CaES2645 Chr00 596160985 2e-73
CaES0108 Chr00 596945333 5e-46
CaES0811 Chr00 598740959 1e-102
CaES5305 Chr00 599835228 2e-59
CaES5681 Chr00 600361282 1e-132
CaES0900 Chr00 600362712 1e-135
CaES1074 Chr00 600712273 1e-133
CaES4760 Chr00 602997995 1e-165
CaES3739 Chr00 603568717 3e-79
CaES1943 Chr00 603762467 1e-121
CaES3884 Chr00 604437148 1e-123
CaES1253 Chr00 604437941 5e-97
CaES4450 Chr00 605622999 1e-134
CaES3888 Chr00 606631118 1e-151
CaES0425 0.35 192 Chr00 607950180 2e-92
CaES2768 Chr00 611811522 5e-21
CaES5239 Chr00 611858261 1e-103
CaES2999 Chr00 611863790 1e-45
CaES5017 Chr00 614976171 1e-113
CaES2376 Chr00 616237474 1e-134
CaES0948 Chr00 617481741 3e-99
CaES2170 Chr00 618250269 1e-133
CaES2838 Chr00 618257047 1e-118
CaES1381 Chr00 618280115 9e-94
CaES1398 Chr00 618282715 1e-128
CaES3223 Chr00 618293465 8e-50
CaES2942 Chr00 618314898 2e-95
CaES3567 Chr00 618355231 1e-122
CaES1996 Chr00 618795090 1e-78
CaES5218 Chr00 618820425 2e-79
CaES5289 Chr00 618854514 2e-42
CaES5031 Chr00 618865409 1e-143
CaES1817 Chr00 618880522 2e-45
CaES2418 Chr00 619008997 1e-116
CaES1402 Chr00 621257992 1e-123
CaES2785 Chr00 623041712 1e-113
CaES5417 Chr00 623249750 6e-33
CaES4285 Chr00 623254682 2e-95
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum