Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TGS3785 SL2.40ch12 4418266 1e-111
TES6537 SL2.40ch12 4423165 0.0
TES4451 SL2.40ch12 4452542 0.0
9578_326 SL2.40ch12 4462344 0.0 ch12 61.678 ch12 41.441
TGS9032 SL2.40ch12 4497032 0.0
TGS10219 SL2.40ch12 4498647 0.0
TES5288 SL2.40ch12 4508892 0.0
TGS7708 SL2.40ch12 4511953 0.0
TES4273 SL2.40ch12 4529295 0.068
TGS4915 SL2.40ch12 4539178 0.0
TGS0724 SL2.40ch12 4558753 0.0 ch12 49.877 ch12 62.202
TES3778 SL2.40ch12 4574354 0.0
TGS6183 SL2.40ch12 4586850 0.0
TES5342 SL2.40ch12 4591417 1e-174
TGS1502 SL2.40ch12 4591720 0.0 ch12 51.133
TES0596 SL2.40ch12 4591738 0.0
TES1586 SL2.40ch12 4598061 0.0
3901_591 SL2.40ch12 4598061 0.0 ch12 62.732 ch12 42.931
TGS2929 SL2.40ch12 4600059 0.0
TGS5498 SL2.40ch12 4600259 0.0
TES5559 SL2.40ch12 4654892 0.0
TGS12219 SL2.40ch12 4663751 0.0
TG360 SL2.40ch12 4678024 0.0 ch12 50.67
TES0406 SL2.40ch12 4682040 1e-167 ch12 50.816
TGS9837 SL2.40ch12 4686908 0.0
TES2899 SL2.40ch12 4695059 0.0
TGS1537 SL2.40ch12 4737908 0.0
11243_1136 SL2.40ch12 4739229 0.0
11243_820 SL2.40ch12 4739229 0.0
TES2116 SL2.40ch12 4740329 0.0
TES3389 SL2.40ch12 4741557 0.0
TGS12977 SL2.40ch12 4749955 0.0
TGS7367 SL2.40ch12 4753737 0.0
TGS0456 SL2.40ch12 4766690 1e-161 ch12 48.57 ch12 63.819
TGS2418 SL2.40ch12 4779168 0.0
TGS9472 SL2.40ch12 4819157 0.0
TES7044 SL2.40ch12 4825471 0.0
TES4026 SL2.40ch12 4825484 0.0
TES0412 SL2.40ch12 4850326 0.0
TGS1299 SL2.40ch12 4851299 0.0
TES5590 SL2.40ch12 4855724 0.0
TES2560 SL2.40ch12 4856628 0.0
TGS3266 SL2.40ch12 4914912 0.0 ch12 50.327
TES2042 SL2.40ch12 4915410 0.0 ch12 48.922
10032_1257 SL2.40ch12 4926448 0.0
TES4149 SL2.40ch12 4926472 0.0
TES6320 SL2.40ch12 4933946 0.0
TES1808 SL2.40ch12 4934782 0.0
TGS1083 SL2.40ch12 4991221 0.0 ch12 49.485
TGS5368 SL2.40ch12 5027188 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum