Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES1978 SL2.40ch12 3871773 0.0 ch12 46.553
TES6450 SL2.40ch12 3877932 0.0
TES7536 SL2.40ch12 3892580 0.0
5695_744 SL2.40ch12 3893314 0.0
5695_779 SL2.40ch12 3893314 0.0
5695_790 SL2.40ch12 3893314 0.0
5695_801 SL2.40ch12 3893314 0.0
5695_879 SL2.40ch12 3893314 0.0
5695_919 SL2.40ch12 3893314 0.0
5695_969 SL2.40ch12 3893314 0.0
TGS10071 SL2.40ch12 3895333 0.0
TGS4468 SL2.40ch12 3899252 0.0
TES2910 SL2.40ch12 3923636 0.0
TGS11585 SL2.40ch12 3989873 0.0
TGS5729 SL2.40ch12 3995600 0.0
TGS0877 SL2.40ch12 4012027 0.0
TGS1200 SL2.40ch12 4033181 0.0 ch12 48.031
TGS10620 SL2.40ch12 4067859 0.0
TGS4761 SL2.40ch12 4108147 0.0
11997_195 SL2.40ch12 4132323 0.0
TGS4760 SL2.40ch12 4133386 0.0
SSR135 SL2.40ch12 4134678 1e-102 ch01 59.46
TGS3396 SL2.40ch12 4160021 0.0
TES3213 SL2.40ch12 4162384 0.0
TES2850 SL2.40ch12 4162384 0.0
TGS3486 SL2.40ch12 4183126 0.0
TGS0233 SL2.40ch12 4209068 1e-115
TGS8612 SL2.40ch12 4210669 0.0
TGS13489 SL2.40ch12 4250473 0.0
14286_587 SL2.40ch12 4251538 0.0
TES5328 SL2.40ch12 4257533 1e-136
TES3032 SL2.40ch12 4258438 1e-166
TES1564 SL2.40ch12 4264115 0.0 ch12 47.235
TGS0200 SL2.40ch12 4299391 3e-95
TGS0144 SL2.40ch12 4308849 0.0 ch12 46.98 ch12 60.832
TGS4721 SL2.40ch12 4314090 0.0
TGS12646 SL2.40ch12 4336035 0.0
TGS3854 SL2.40ch12 4336044 0.0
TGS6992 SL2.40ch12 4337948 0.0
TGS9858 SL2.40ch12 4342962 0.0
TGS1610 SL2.40ch12 4345156 0.0
TGS0011 SL2.40ch12 4354237 0.0
TGS4102 SL2.40ch12 4373646 0.0
TES1363 SL2.40ch12 4379737 0.0
TES2511 SL2.40ch12 4384763 0.0
TGS8515 SL2.40ch12 4398344 0.0
TES6446 SL2.40ch12 4402684 1e-163
TGS4523 SL2.40ch12 4410028 0.0
TGS8379 SL2.40ch12 4415058 0.0
TGS1762 SL2.40ch12 4417555 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum