Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
tma0197 SL2.40ch12 35594221 1e-167 ch12 61.449
tmb0076 SL2.40ch12 40328655 0.0 ch12 61.473
TGS0684 SL2.40ch12 24970064 0.0 ch12 61.518
TGS2342 SL2.40ch12 41975407 0.0 ch12 61.564
TGS3490 SL2.40ch12 23397818 0.0 ch12 61.729
TGS1082 SL2.40ch12 7273451 0.0 ch12 61.814
tmb0025 SL2.40ch12 24981786 0.0 ch12 61.954
TGS3362 SL2.40ch12 41424729 0.0 ch12 62.048
TGS0153 SL2.40ch12 28961414 1e-126 ch12 62.148
TGS3032 SL2.40ch12 14704699 0.0 ch12 62.491
TGS2978 SL2.40ch12 14950113 0.0 ch12 62.669
tma0022 SL2.40ch12 35488101 0.0 ch12 63.136
TES0064 SL2.40ch12 44067522 0.0 ch12 63.304
TES1421 SL2.40ch12 49933293 0.0 ch12 63.405
T1499 SL2.40ch12 47136531 5e-71 ch12 63.753
tma0036 SL2.40ch12 60267067 0.0 ch12 63.926
TGS0362 SL2.40ch12 55013158 0.0 ch12 64.052 ch12 76.95
TES0317 SL2.40ch12 46224289 0.0 ch12 64.353 ch12 90.653
TGS0145 SL2.40ch12 57314412 0.0 ch12 64.45
TES0585 SL2.40ch12 46668480 0.0 ch12 64.647
TGS0428 SL2.40ch12 52589167 0.0 ch12 64.891 ch12 77.024
TGS0107 SL2.40ch12 7796462 0.0 ch12 65.03
TES1980 SL2.40ch12 47199064 0.0 ch12 65.367
TES1788 SL2.40ch12 46637527 0.0 ch12 65.705
TG394 SL2.40ch12 47258444 0.0 ch12 66.064
TG367 SL2.40ch12 47452030 0.0 ch12 66.188
TGS0318 SL2.40ch12 34588677 0.0 ch12 66.932 ch12 77.059
TGS0376 SL2.40ch12 36357413 0.0 ch12 67.359
P68 SL2.40ch12 47762779 1e-136 ch12 68.062
TGS0329 SL2.40ch12 60747246 0.0 ch12 69.09
TGS0658 SL2.40ch12 37167552 0.0 ch12 69.74 ch12 77.43
TGS3343 SL2.40ch12 8017397 0.0 ch12 70.732
TES0743 SL2.40ch12 48398167 0.0 ch12 73.03
TES1686 SL2.40ch12 48542188 0.0 ch12 73.764
P64 SL2.40ch12 61777822 1e-139 ch12 74.464
tma0294 SL2.40ch12 62048953 0.0 ch12 75.63
TGS0927 SL2.40ch12 62078945 0.0 ch12 78.047
T1483 SL2.40ch12 62394346 0.0 ch12 79.673
tme0089 SL2.40ch12 62021661 0.0 ch12 80.508
C2_At4g16580 SL2.40ch12 62658020 0.0 ch12 81.122
TES0338 SL2.40ch12 62516569 0.0 ch12 82.601
TES1152 SL2.40ch12 62563974 0.0 ch12 82.601
TES0112 SL2.40ch12 62585033 1e-106 ch12 83.463
TES0717 SL2.40ch12 62958240 0.0 ch12 88.604
TES0839 SL2.40ch12 63499099 0.0 ch12 90.48
TES2045 SL2.40ch12 63553902 0.0 ch12 92.276
TGS0838 SL2.40ch12 63031297 0.0 ch12 92.897
TEI0015 SL2.40ch12 63143441 0.0 ch12 93.704
TEI0119 SL2.40ch12 63417890 0.0 ch12 94.231
cTOF31A1 SL2.40ch12 63237909 2e-95 ch12 94.868
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


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