Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
533_1024 SL2.40ch12 962511 1e-127
533_1410 SL2.40ch12 962511 1e-127 ch12 7.425 ch12 5.126
TGS13165 SL2.40ch12 975112 0.0
TES5267 SL2.40ch12 1005957 0.0
TGS5727 SL2.40ch12 1015136 0.0
TES2393 SL2.40ch12 1027231 1e-117
TGS13252 SL2.40ch12 1043022 0.0
12495_472 SL2.40ch12 1045885 1e-103
TGS8847 SL2.40ch12 1049816 0.0
TGS8598 SL2.40ch12 1055297 0.0
TES4113 SL2.40ch12 1079619 0.0
TGS8963 SL2.40ch12 1080670 0.0
TES3805 SL2.40ch12 1097723 0.0
TES4802 SL2.40ch12 1117490 1e-93
TGS5888 SL2.40ch12 1150108 0.0
13470_327 SL2.40ch12 1153622 0.0
13470_472 SL2.40ch12 1153622 0.0
13470_755 SL2.40ch12 1153622 0.0 ch12 10.793 ch12 6.301
6581_362 SL2.40ch12 1166421 0.0 ch12 11.734 ch12 6.693
TGS0231 SL2.40ch12 1188147 0.0
TES2233 SL2.40ch12 1195832 0.0
TES6326 SL2.40ch12 1248630 0.0
14548_152 SL2.40ch12 1300264 0.0 ch12 13.223 ch12 7.978
14548_218 SL2.40ch12 1300264 0.0
14548_359 SL2.40ch12 1300264 0.0
1753_120 SL2.40ch12 1322735 0.0
TES6982 SL2.40ch12 1336745 1e-103
TES5900 SL2.40ch12 1341987 0.0
4489_957 SL2.40ch12 1349233 0.0
tme0054 SL2.40ch12 1349233 0.0 ch12 26.442
U216669 SL2.40ch12 1352542 0.0 ch12 24.461
9146_400 SL2.40ch12 1352542 0.0 ch12 13.223 ch12 8.802
TES2087 SL2.40ch12 1374670 0.0
TES1919 SL2.40ch12 1413220 0.0 ch12 18.245
11768_521 SL2.40ch12 1413656 0.0
TES4243 SL2.40ch12 1425888 3e-93
TES5079 SL2.40ch12 1438505 0.0
TES1566 SL2.40ch12 1446921 2e-91
TES4590 SL2.40ch12 1490823 0.0
TES0027 SL2.40ch12 1498919 1e-111 ch12 21.438 ch12 17.623
TES2923 SL2.40ch12 1513185 0.0
TES3203 SL2.40ch12 1513185 0.0
TGS3539 SL2.40ch12 1527413 0.0
TGS7461 SL2.40ch12 1536262 0.0
TES4245 SL2.40ch12 1536448 0.0
TES7265 SL2.40ch12 1549922 0.0
TES2977 SL2.40ch12 1550963 0.0
TES2238 SL2.40ch12 1555549 0.0
TES1515 SL2.40ch12 1567282 0.0 ch12 27.407
TGS6278 SL2.40ch12 1568910 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


MarkerDB | Solanum lycopersicum