Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch12

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1993


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TGS0752 SL2.40ch12 37355320 0.0 ch12 55.041
TES0500 SL2.40ch12 5655522 0.0 ch12 55.649
TES0471 SL2.40ch12 6355464 1e-154 ch12 55.7 ch12 74.093
C2_At3g13180 SL2.40ch12 5690380 6e-57 ch12 56.419
TGS1162 SL2.40ch12 5523860 0.0 ch12 56.672 ch12 67.673
TES1779 SL2.40ch12 6459047 0.0 ch12 56.872
T1266 SL2.40ch12 47991353 0.0 ch12 57.237
TGS0698 SL2.40ch12 46654602 0.0 ch12 57.849
TES0123 SL2.40ch12 36291810 0.0 ch12 58.252
TEI0815 SL2.40ch12 6426783 0.0 ch12 58.407
TG111 SL2.40ch12 47133269 0.0 ch12 58.579
TGS2098 SL2.40ch12 46820977 0.0 ch12 58.793
TGS3485 SL2.40ch12 46975088 0.0 ch12 58.793 ch12 93.601
T1684 SL2.40ch12 45651057 1e-129 ch12 59.109
tma0076 SL2.40ch12 46020722 0.0 ch12 59.189
TES0367 SL2.40ch12 8878140 0.0 ch12 59.335
TEI0206 SL2.40ch12 45656483 1e-142 ch12 59.392
TGS0512 SL2.40ch12 31561162 0.0 ch12 59.508 ch12 77.059
TES1677 SL2.40ch12 14337013 0.0 ch12 59.547
TES0249 SL2.40ch12 40280677 0.0 ch12 59.615
TGS0253 SL2.40ch12 24647123 0.0 ch12 59.725
TES1016 SL2.40ch12 49501182 0.0 ch12 59.75
tmb0012 SL2.40ch12 39551111 0.0 ch12 60.027
TGS3097 SL2.40ch12 11268717 1e-178 ch12 60.161
TGS0879 SL2.40ch12 31819491 0.0 ch12 60.161
TGS0363 SL2.40ch12 24981786 0.0 ch12 60.199 ch12 76.686
TES1800 SL2.40ch12 44710363 0.0 ch12 60.203 ch12 83.926
cLPT-1-F6 SL2.40ch12 45440254 3e-66 ch12 60.367
tmb0050 SL2.40ch12 16715248 0.0 ch12 60.452
tmb0101 SL2.40ch12 49841874 0.0 ch12 60.454
TGS0793 SL2.40ch12 14713727 0.0 ch12 60.487
TGS1966 SL2.40ch12 19430139 0.0 ch12 60.487
TGS2938 SL2.40ch12 43380074 0.0 ch12 60.487
TGS2093 SL2.40ch12 43800699 0.0 ch12 60.487
TGS1694 SL2.40ch12 54325752 0.0 ch12 60.487
TGS1202 SL2.40ch12 28707889 1e-101 ch12 60.488
cLET8G15 SL2.40ch12 44610144 1e-170 ch12 60.491
TGS2450 SL2.40ch12 43450672 0.0 ch12 60.494
SSR124 SL2.40ch12 45080509 1e-150 ch12 60.586
tma0052 SL2.40ch12 10806510 0.0 ch12 60.636
TGS1738 SL2.40ch12 22444557 0.0 ch12 60.737
TGS1031 SL2.40ch12 54827060 0.0 ch12 60.814
cLEG-24-B23 SL2.40ch12 45586405 9e-76 ch12 60.872
TGS0199 SL2.40ch12 37219758 0.0 ch12 60.922 ch12 78.059
TGS0339 SL2.40ch12 7855333 0.0 ch12 60.944 ch12 76.953
tma0270 SL2.40ch12 56896593 0.0 ch12 61.132
TGS2328 SL2.40ch12 34464158 0.0 ch12 61.188
TGS2058 SL2.40ch12 37725064 0.0 ch12 61.27 ch12 78.976
tmb0075 SL2.40ch12 30052351 0.0 ch12 61.315
TGS2087 SL2.40ch12 29355202 0.0 ch12 61.385
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1993


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