Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch10

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1955


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
tme0013 SL2.40ch10 17701028 0.0 ch01 18.566
TEI1013 SL2.40ch10 47557183 0.0 ch02 85.66
tma0296 SL2.40ch10 29452786 0.0 ch05 81.395
TGS0045 SL2.40ch10 28226560 0.0 ch06 10.797
TEI0978 SL2.40ch10 62310575 0.0 ch06 33.179
TES1099 SL2.40ch10 48688098 0.0 ch09 48.881
TG230 SL2.40ch10 1022681 0.0 ch10 0.0
cLEC-5-E20 SL2.40ch10 1177790 3e-84 ch10 3.666
TGS3021 SL2.40ch10 1109686 0.0 ch10 4.168
TES1454 SL2.40ch10 1225613 0.0 ch10 5.702
TG395 SL2.40ch10 2314242 1e-141 ch10 6.083
TES1154 SL2.40ch10 1428373 0.0 ch10 8.266
TGS0738 SL2.40ch10 1602510 1e-104 ch10 10.541
TES1174 SL2.40ch10 1748230 0.0 ch10 11.294
T1551 SL2.40ch10 1627132 0.0 ch10 11.376
TES0171 SL2.40ch10 1838114 0.0 ch10 13.86
TEI0190 SL2.40ch10 1826253 0.0 ch10 14.461
TGS3422 SL2.40ch10 2431470 1e-161 ch10 18.549
T1391 SL2.40ch10 1948955 1e-150 ch10 19.366
TES1432 SL2.40ch10 2484060 0.0 ch10 19.934
TES1740 SL2.40ch10 2533344 1e-144 ch10 20.118
TEI0220 SL2.40ch10 46854723 0.0 ch10 20.414
T787 SL2.40ch10 2312403 1e-173 ch10 20.678
TGS0656 SL2.40ch10 2653203 0.0 ch10 22.148
TES0440 SL2.40ch10 3007347 0.0 ch10 22.625
CT234 SL2.40ch10 2642450 0.0 ch10 22.858
TES0048 SL2.40ch10 2896145 1e-169 ch10 23.331
TGS1326 SL2.40ch10 3409425 0.0 ch10 25.035
TGS2789 SL2.40ch10 29097580 0.0 ch10 26.087
TGS0617 SL2.40ch10 57342593 0.0 ch10 26.617
TGS1921 SL2.40ch10 3285425 0.0 ch10 27.281
TES0720 SL2.40ch10 3425245 0.0 ch10 27.5
TG560 SL2.40ch10 4402297 0.0 ch10 28.193
TES0487 SL2.40ch10 57651617 0.0 ch10 28.816
TEI0683 SL2.40ch10 58017802 1e-166 ch10 29.111
TG280 SL2.40ch10 58801455 0.0 ch10 29.228
tma0044 SL2.40ch10 29704668 0.0 ch10 29.731
TES0790 SL2.40ch10 57463903 0.0 ch10 30.291
TES1534 SL2.40ch10 21301905 0.0 ch10 30.579
cLED-11-F6 SL2.40ch10 52261199 3e-66 ch10 30.758
SSR248 SL2.40ch10 52294802 0.0 ch10 30.764
TES1409 SL2.40ch10 52439647 1e-180 ch10 30.769
TGS1123 SL2.40ch10 52570329 0.0 ch10 30.769
TGS0643 SL2.40ch10 24372547 0.0 ch10 31.006
TGS1918 SL2.40ch10 52118972 0.0 ch10 31.117
TGS2189 SL2.40ch10 52139312 0.0 ch10 31.154
tma0223 SL2.40ch10 30483038 0.0 ch10 31.31
TGS2294 SL2.40ch10 19650161 0.0 ch10 31.359
TGS2358 SL2.40ch10 11280134 0.0 ch10 31.387
TGS2431 SL2.40ch10 48291446 0.0 ch10 31.496
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1955


MarkerDB | Solanum lycopersicum