Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch09

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2615


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES0306 SL2.40ch09 16844876 0.0 ch02 42.709
TES1523 SL2.40ch09 65897200 0.0 ch05 117.146
TES1103 SL2.40ch09 4650975 0.0 ch06 67.401
cTOF11I4 SL2.40ch09 755194 0.0 ch07 3.78
TES1614 SL2.40ch09 3716052 0.0 ch07 11.849
cLPT-4-C24 SL2.40ch09 240116 0.0 ch09 0.0
TES0036 SL2.40ch09 732712 0.0 ch09 4.224 ch09 3.561
T1641 SL2.40ch09 1096944 1e-162 ch09 9.185
TGS2555 SL2.40ch09 1074948 0.0 ch09 10.354
TES1477 SL2.40ch09 1152556 0.0 ch09 10.653
TGS0435 SL2.40ch09 1110131 0.0 ch09 11.807 ch09 6.258
TES1696 SL2.40ch09 1208365 0.0 ch09 14.358
TEI0336 SL2.40ch09 1436715 0.0 ch09 15.569 ch09 12.185
TES1393 SL2.40ch09 1920742 0.0 ch09 24.304
TG9 SL2.40ch09 1908721 0.0 ch09 24.348
TGS2174 SL2.40ch09 2223021 0.0 ch09 26.375
T1673 SL2.40ch09 2056785 1e-161 ch09 26.778
TGS0426 SL2.40ch09 2324624 0.0 ch09 28.182
T532 SL2.40ch09 2374503 4e-71 ch09 28.677
cLET-7-O3 SL2.40ch09 2644377 0.0 ch09 29.925
SSR73 SL2.40ch09 2669084 1e-180 ch09 30.241
TES1059 SL2.40ch09 3095829 1e-180 ch09 31.723
TES0559 SL2.40ch09 3521375 1e-158 ch09 32.89
TGS0240 SL2.40ch09 3306765 0.0 ch09 34.891
Brix9-2-5 SL2.40ch09 3477091 0.0 ch09 36.106
TGS1315 SL2.40ch09 5341150 0.0 ch09 37.381
TES1985 SL2.40ch09 3402181 0.0 ch09 38.829
TES1183 SL2.40ch09 3809931 0.0 ch09 39.146
T1617 SL2.40ch09 3741845 1e-135 ch09 39.832
TGS1354 SL2.40ch09 4012333 0.0 ch09 39.847
TGS0170 SL2.40ch09 4412565 0.0 ch09 41.971
TES1157 SL2.40ch09 4029219 0.0 ch09 42.509
tme0014 SL2.40ch09 58817363 0.0 ch09 43.13
TGS2744 SL2.40ch09 23436232 0.0 ch09 43.971
TES0176 SL2.40ch09 59693015 0.0 ch09 44.346
cTOB1K3 SL2.40ch09 4382284 0.0 ch09 44.801
tma0288 SL2.40ch09 15001793 0.0 ch09 45.188
TES1143 SL2.40ch09 4641013 4e-94 ch09 45.457
TGS0365 SL2.40ch09 45191406 0.0 ch09 45.816 ch09 63.971
TES0551 SL2.40ch09 57667526 0.0 ch09 46.182
TES0184 SL2.40ch09 58817336 1e-171 ch09 46.632
TGS1193 SL2.40ch09 38617352 0.0 ch09 47.063
TGS0160 SL2.40ch09 58486303 0.0 ch09 47.718
TES1418 SL2.40ch09 5203564 0.0 ch09 47.873
TES0042 SL2.40ch09 57199547 0.0 ch09 48.136
TGS2552 SL2.40ch09 56020562 0.0 ch09 48.513
T1212 SL2.40ch09 5090065 0.0 ch09 49.146
tma0144 SL2.40ch09 11618628 0.0 ch09 49.435
TGS2762 SL2.40ch09 13502941 0.0 ch09 49.646
TGS1359 SL2.40ch09 16964934 0.0 ch09 50.073
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2615


MarkerDB | Solanum lycopersicum