Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
7273_256 SL2.40ch05 3720291 0.0 ch05 0.0
7699_1396 SL2.40ch05 4442246 0.0 ch05 3.183 ch05 6.586
11239_490 SL2.40ch05 4467984 0.0 ch05 3.183 ch05 6.586
3173_646 SL2.40ch05 4989560 0.0 ch05 5.652 ch05 11.589
12619_399 SL2.40ch05 4990025 0.0 ch05 5.652 ch05 11.589
5920_688 SL2.40ch05 5155345 1e-179 ch05 7.034 ch05 12.579
7913_1495 SL2.40ch05 5269597 0.0 ch05 6.946 ch05 16.03
10897_342 SL2.40ch05 5312151 0.0 ch05 7.996 ch05 16.03
10727_352 SL2.40ch05 5465885 0.0 ch05 8.551 ch05 16.512
7138_174 SL2.40ch05 5638083 0.0 ch05 13.761 ch05 17.962
12600_152 SL2.40ch05 5651884 0.0 ch05 14.089 ch05 17.962
6740_285 SL2.40ch05 5788083 0.0 ch05 16.327 ch05 20.391
15864_257 SL2.40ch05 5846036 0.0 ch05 15.682 ch05 22.394
10711_364 SL2.40ch05 5890908 0.0 ch05 16.327 ch05 22.775
10411_880 SL2.40ch05 6126287 0.0 ch05 19.579 ch05 24.08
3252_247 SL2.40ch05 6171145 0.0 ch05 19.579 ch05 24.08
2932_315 SL2.40ch05 6226972 0.0 ch05 19.579 ch05 24.08
3718_629 SL2.40ch05 6280835 0.0 ch05 19.551 ch05 24.097
8447_108 SL2.40ch05 6388489 0.0 ch05 19.579 ch05 24.956
11729_478 SL2.40ch05 6404712 0.0 ch05 19.551 ch05 24.976
13200_233 SL2.40ch05 6571646 0.0 ch05 22.552 ch05 25.371
5890_630 SL2.40ch05 6848870 0.0 ch05 26.846 ch05 27.15
1504_282 SL2.40ch05 6934300 0.0 ch05 29.138 ch05 27.558
18191_196 SL2.40ch05 6944423 0.0 ch05 29.604 ch05 27.59
2276_805 SL2.40ch05 6986130 0.0 ch05 31.266 ch05 27.999
5578_297 SL2.40ch05 7051692 0.0 ch05 32.345 ch05 28.404
9599_1443 SL2.40ch05 7059122 0.0 ch05 32.345 ch05 28.404
12080_1090 SL2.40ch05 7066238 0.0 ch05 32.345 ch05 28.47
21703_309 SL2.40ch05 7013390 0.0 ch05 31.266 ch05 28.48
6576_179 SL2.40ch05 7494865 0.0 ch05 34.957 ch05 30.213
4441_209 SL2.40ch05 7616734 0.0 ch05 34.957 ch05 30.542
7166_427 SL2.40ch05 7818051 0.0 ch05 34.957 ch05 30.662
7551_525 SL2.40ch05 8176565 0.0 ch05 31.373
6927_762 SL2.40ch05 10112906 0.0 ch05 32.488
453_627 SL2.40ch05 10449173 0.0 ch05 40.652 ch05 32.488
6377_590 SL2.40ch05 8920507 0.0 ch05 32.642
4438_682 SL2.40ch05 8967253 0.0 ch05 32.642
11213_482 SL2.40ch05 10295852 0.0 ch05 40.652 ch05 32.642
7742_1217 SL2.40ch05 13143973 0.0 ch05 40.493 ch05 33.304
4053_2893 SL2.40ch05 29175787 0.0 ch05 40.493 ch05 33.304
1604_647 SL2.40ch05 37516538 0.0 ch05 40.493 ch05 33.304
13635_371 SL2.40ch05 15420520 0.0 ch05 40.493 ch05 33.337
8637_176 SL2.40ch05 15575053 1e-111 ch05 40.493 ch05 33.337
10717_2180 SL2.40ch05 16840666 0.0 ch05 33.337
11709_1882 SL2.40ch05 19343457 0.0 ch05 33.337
9026_540 SL2.40ch05 23546206 0.0 ch05 33.337
5074_365 SL2.40ch05 25878448 0.0 ch05 33.337
6759_846 SL2.40ch05 29423358 0.0 ch05 33.337
6695_110 SL2.40ch05 36887656 0.0 ch05 40.493 ch05 33.337
6319_699 SL2.40ch05 52543807 0.0 ch05 33.704
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum