Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
9768_1494 SL2.40ch05 60306496 0.0 ch05 40.389
9768_1606 SL2.40ch05 60306496 0.0
9768_1630 SL2.40ch05 60306496 0.0
9793_499 SL2.40ch05 2784050 1e-144
9793_539 SL2.40ch05 2784050 1e-144
9793_719 SL2.40ch05 2784050 1e-144
9856_304 SL2.40ch05 4827299 0.0
9856_318 SL2.40ch05 4827299 0.0
9859_476 SL2.40ch05 57183494 0.0
C2_At1g27980 SL2.40ch05 12530756 0.0 ch05 80.949
C2_At3g24050 SL2.40ch05 62727175 0.0 ch09 91.696
C2_At5g49510 SL2.40ch05 62636372 0.0 ch05 114.67
CD64 SL2.40ch05 3737310 3e-84 ch05 48.471
cLET-7-N9 SL2.40ch05 5318901 1e-113 ch05 69.0
CT167 SL2.40ch05 2673864 1e-154 ch05 34.521
CT172 SL2.40ch05 62108470 4e-51 ch05 107.488
CT93 SL2.40ch05 4654141 1e-112 ch05 61.444
SSR115 SL2.40ch05 2732458 0.0 ch05 36.668
T1181 SL2.40ch05 81650 0.0 ch05 0.0
T1252 SL2.40ch05 345049 1e-153 ch05 0.952
T1319 SL2.40ch05 16805241 0.0 ch05 80.97
T1335 SL2.40ch05 3637890 0.0 ch05 46.081
T1440 SL2.40ch05 352256 1e-122 ch05 2.975
T1584 SL2.40ch05 63554176 1e-156 ch05 124.259
T1592 SL2.40ch05 1652536 3e-96 ch05 17.003
T1746 SL2.40ch05 61709142 1e-140 ch05 97.215
T181 SL2.40ch05 10764160 6e-80 ch05 80.97
T328 SL2.40ch05 19276852 8e-85 ch05 80.902
T40 SL2.40ch05 7498863 4e-87 ch05 77.968
T633 SL2.40ch05 64597878 1e-172 ch05 137.915
T730 SL2.40ch05 61254148 1e-109 ch05 90.836
TEI0061 SL2.40ch05 62497100 0.0 ch05 111.332
TEI0063 SL2.40ch05 7503250 0.0 ch05 81.616 ch05 34.911
TEI0145 SL2.40ch05 1649088 0.0 ch05 18.17
TEI0177 SL2.40ch05 1043765 0.0 ch05 9.604
TEI0186 SL2.40ch05 58968965 0.0 ch05 84.818
TEI0326 SL2.40ch05 9189061 0.0 ch05 81.728
TEI0331 SL2.40ch05 356423 0.0 ch05 2.6
TEI0467 SL2.40ch05 4990025 0.0 ch05 65.77
TEI0772 SL2.40ch05 384811 0.0 ch05 4.218
TES0002 SL2.40ch05 34412686 1e-115
TES0012 SL2.40ch05 2614801 0.0 ch05 32.87
TES0018 SL2.40ch05 5547327 0.0 ch07 46.643 ch07 59.048
TES0045 SL2.40ch05 60371473 0.0 ch05 88.455
TES0053 SL2.40ch05 2164467 1e-164 ch05 25.667
TES0062 SL2.40ch05 6227010 0.0 ch05 73.73
TES0067 SL2.40ch05 62508289 1e-141
TES0069 SL2.40ch05 60589018 0.0 ch05 92.099
TES0089 SL2.40ch05 60224505 0.0 ch05 88.006
TES0090 SL2.40ch05 3208821 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum