Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
4394_510 SL2.40ch05 56137853 0.0
4438_682 SL2.40ch05 8967253 0.0 ch05 32.642
4441_1537 SL2.40ch05 7616734 0.0
4441_209 SL2.40ch05 7616734 0.0 ch05 34.957 ch05 30.542
4504_193 SL2.40ch05 439564 0.0
453_168 SL2.40ch05 10449173 0.0
453_312 SL2.40ch05 10449173 0.0
453_334 SL2.40ch05 10449173 0.0
453_627 SL2.40ch05 10449173 0.0 ch05 40.652 ch05 32.488
4583_1025 SL2.40ch05 58767590 0.0 ch05 43.86
4668_1095 SL2.40ch05 10485070 0.0
474_182 SL2.40ch05 5800390 0.0
474_441 SL2.40ch05 5800390 0.0
474_477 SL2.40ch05 5800390 0.0
4789_2351 SL2.40ch05 56226835 0.0
4894_1294 SL2.40ch05 7023738 1e-146
5074_365 SL2.40ch05 25878448 0.0 ch05 33.337
5102_1247 SL2.40ch05 7004089 0.0
5102_496 SL2.40ch05 7004089 0.0
5145_1594 SL2.40ch05 5575212 0.0
5203_379 SL2.40ch05 5810641 1e-177
5287_164 SL2.40ch05 58553965 2e-99
5318_1195 SL2.40ch05 4377834 0.0
5433_169 SL2.40ch05 11598043 0.0
5433_185 SL2.40ch05 11598043 0.0
5433_244 SL2.40ch05 11598043 0.0
5433_92 SL2.40ch05 11598043 0.0 ch05 40.493
5578_297 SL2.40ch05 7051692 0.0 ch05 32.345 ch05 28.404
5578_494 SL2.40ch05 7051692 0.0
5579_1359 SL2.40ch05 31013375 0.0
5579_286 SL2.40ch05 31013375 0.0
5671_1323 SL2.40ch05 62387963 0.0
5671_1386 SL2.40ch05 62387963 0.0 ch05 61.74
5671_1453 SL2.40ch05 62387963 0.0
5671_1530 SL2.40ch05 62387963 0.0
5671_1647 SL2.40ch05 62387963 0.0
5671_1900 SL2.40ch05 62387963 0.0
5671_1930 SL2.40ch05 62387963 0.0
5671_1989 SL2.40ch05 62387963 0.0
5768_1347 SL2.40ch05 4147968 0.0 ch05 0.11
5799_537 SL2.40ch05 59238334 0.0 ch05 44.081
5890_1201 SL2.40ch05 6848870 0.0
5890_630 SL2.40ch05 6848870 0.0 ch05 26.846 ch05 27.15
5920_688 SL2.40ch05 5155345 1e-179 ch05 7.034 ch05 12.579
5981_940 SL2.40ch05 4146272 0.0
5989_849 SL2.40ch05 2576959 0.0
6086_326 SL2.40ch05 6244938 0.0
6319_699 SL2.40ch05 52543807 0.0 ch05 33.704
6324_644 SL2.40ch05 64558572 0.0
6377_590 SL2.40ch05 8920507 0.0 ch05 32.642
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum