Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
4040_247 SL2.40ch05 43177217 1e-159 ch05 33.736
6610_1322 SL2.40ch05 43297872 0.0 ch05 33.736
7695_602 SL2.40ch05 57671700 0.0 ch05 34.26
15118_762 SL2.40ch05 58170292 0.0 ch05 39.252 ch05 34.315
8003_500 SL2.40ch05 58241371 0.0 ch05 42.991 ch05 35.051
13496_375 SL2.40ch05 60279915 0.0 ch05 39.928
11695_363 SL2.40ch05 60285815 0.0 ch05 39.928
9768_1494 SL2.40ch05 60306496 0.0 ch05 40.389
11748_596 SL2.40ch05 60343557 0.0 ch05 40.389
6734_219 SL2.40ch05 60379897 0.0 ch05 40.389
11279_521 SL2.40ch05 60383542 1e-169 ch05 40.389
16209_397 SL2.40ch05 60755267 0.0 ch05 43.68
15937_184 SL2.40ch05 60845909 1e-178 ch05 44.412
13804_497 SL2.40ch05 62199390 0.0 ch05 58.484
5671_1386 SL2.40ch05 62387963 0.0 ch05 61.74
1267_1268 SL2.40ch05 62421691 0.0 ch05 61.74
3041_675 SL2.40ch05 62497100 0.0 ch05 64.397
3407_473 SL2.40ch05 62579303 0.0 ch05 66.147
9170_1194 SL2.40ch05 62569370 0.0 ch05 66.196
14173_3113 SL2.40ch05 63128394 0.0 ch05 69.189
7535_526 SL2.40ch05 1878 0.0
TES5990 SL2.40ch05 2886 0.0
TES4239 SL2.40ch05 63484 0.0
TES7315 SL2.40ch05 65889 0.0
TES3640 SL2.40ch05 68949 0.0
T1181 SL2.40ch05 81650 0.0 ch05 0.0
TGS6749 SL2.40ch05 89158 0.0
TGS12890 SL2.40ch05 109318 0.0
TES0729 SL2.40ch05 110804 0.0 ch05 1.459
TGS6705 SL2.40ch05 124088 0.0
TGS2822 SL2.40ch05 160420 0.0
TES0430 SL2.40ch05 161868 0.0 ch05 1.915
TES0690 SL2.40ch05 190012 1e-147 ch05 3.509
TES1813 SL2.40ch05 195100 7e-70
TGS10587 SL2.40ch05 207711 0.0
TES3063 SL2.40ch05 209893 0.0
TES2024 SL2.40ch05 209934 0.0
TGS6273 SL2.40ch05 213564 0.0
TGS8667 SL2.40ch05 221023 0.0
TES2302 SL2.40ch05 244330 0.0
TGS1874 SL2.40ch05 250453 0.0
TES0898 SL2.40ch05 251039 0.0 ch05 1.915
TES7498 SL2.40ch05 262592 0.0
TGS1821 SL2.40ch05 282088 0.0
TGS7205 SL2.40ch05 294224 0.0
TGS7659 SL2.40ch05 323424 0.0
T1252 SL2.40ch05 345049 1e-153 ch05 0.952
TES0956 SL2.40ch05 345230 0.0
T1440 SL2.40ch05 352256 1e-122 ch05 2.975
TEI0331 SL2.40ch05 356423 0.0 ch05 2.6
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


MarkerDB | Solanum lycopersicum