Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch05

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 1956


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES0352 SL2.40ch05 33081772 0.0 ch05 40.129
TGS0874 SL2.40ch05 27169663 0.0 ch05 81.405 ch05 40.303
TGS0225 SL2.40ch05 36869763 0.0 ch05 40.338
5433_92 SL2.40ch05 11598043 0.0 ch05 40.493
7742_1217 SL2.40ch05 13143973 0.0 ch05 40.493 ch05 33.304
TGS1544 SL2.40ch05 13350275 1e-127 ch05 80.374 ch05 40.493
13635_371 SL2.40ch05 15420520 0.0 ch05 40.493 ch05 33.337
8637_176 SL2.40ch05 15575053 1e-111 ch05 40.493 ch05 33.337
TGS0304 SL2.40ch05 19824248 0.0 ch05 40.493
TGS1730 SL2.40ch05 19939445 0.0 ch05 40.493
11240_510 SL2.40ch05 20270407 0.0 ch05 40.493
TGS1703 SL2.40ch05 22796760 0.0 ch05 40.493
4053_2893 SL2.40ch05 29175787 0.0 ch05 40.493 ch05 33.304
902_197 SL2.40ch05 34413211 0.0 ch05 40.493
6695_110 SL2.40ch05 36887656 0.0 ch05 40.493 ch05 33.337
1604_647 SL2.40ch05 37516538 0.0 ch05 40.493 ch05 33.304
TGS0988 SL2.40ch05 38720018 0.0 ch05 40.493
TGS0364 SL2.40ch05 46192191 0.0 ch05 81.347 ch05 40.493
2457_920 SL2.40ch05 53646690 0.0 ch05 40.493
TGS1533 SL2.40ch05 55167288 1e-149 ch05 40.493
TGS0341 SL2.40ch05 53101145 0.0 ch05 82.825 ch05 40.501
TGS1079 SL2.40ch05 24223451 0.0 ch05 40.504
TGS0155 SL2.40ch05 56009425 0.0 ch05 81.799 ch05 40.507
TGS1596 SL2.40ch05 13104082 0.0 ch05 40.525
TGS0633 SL2.40ch05 24524250 0.0 ch05 82.838 ch05 40.525
TGS0481 SL2.40ch05 42104289 0.0 ch05 40.525
TGS0280 SL2.40ch05 56504355 0.0 ch05 40.525
TGS3494 SL2.40ch05 39045623 0.0 ch05 81.405 ch05 40.549
TGS2501 SL2.40ch05 38167122 0.0 ch05 40.58
11213_482 SL2.40ch05 10295852 0.0 ch05 40.652 ch05 32.642
453_627 SL2.40ch05 10449173 0.0 ch05 40.652 ch05 32.488
TGS0661 SL2.40ch05 29726274 0.0 ch05 82.241 ch05 40.716
TGS1325 SL2.40ch05 33105930 0.0 ch05 40.79
TGS2519 SL2.40ch05 40012065 0.0 ch05 84.554 ch05 40.876
TGS2645 SL2.40ch05 52308700 0.0 ch05 81.405 ch05 41.035
TGS0509 SL2.40ch05 55032930 0.0 ch05 41.129
TGS0429 SL2.40ch05 39562583 0.0 ch05 81.288 ch05 41.18
TGS1512 SL2.40ch05 39446500 0.0 ch05 41.333
TGS0057 SL2.40ch05 57627826 0.0 ch05 41.418
TGS0747 SL2.40ch05 25080378 0.0 ch05 41.447
TGS0669 SL2.40ch05 13748021 0.0 ch05 79.888 ch05 41.561
TGS0131 SL2.40ch05 32970223 0.0 ch05 75.819 ch05 42.119
TGS1129 SL2.40ch05 29537969 0.0 ch05 42.576
8003_500 SL2.40ch05 58241371 0.0 ch05 42.991 ch05 35.051
TGS0161 SL2.40ch05 18664242 0.0 ch05 75.346 ch05 43.32
4583_1025 SL2.40ch05 58767590 0.0 ch05 43.86
5799_537 SL2.40ch05 59238334 0.0 ch05 44.081
TES2006 SL2.40ch05 59590765 1e-143 ch05 86.212 ch05 45.521
TGS0495 SL2.40ch05 41232642 0.0 ch05 46.717
TGS2439 SL2.40ch05 8543309 0.0 ch05 49.349
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 1956


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