Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch02

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2300


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
SSR478 SL2.40ch02 31944126 3e-60 ch01 2.311
C2_At5g37260 SL2.40ch02 21311980 0.0 ch02 0.0
TGS0897 SL2.40ch02 21311109 1e-164 ch02 1.018 ch02 26.086
TEI0920 SL2.40ch02 21281397 0.0 ch02 1.118 ch02 27.342
TGS0903 SL2.40ch02 2280606 0.0 ch02 1.54 ch02 22.527
TGS3062 SL2.40ch02 12445332 0.0 ch02 1.742
TGS3056 SL2.40ch02 19637469 0.0 ch02 1.948
TEI0643 SL2.40ch02 1515545 0.0 ch02 2.346
TGS2279 SL2.40ch02 15993618 0.0 ch02 2.426
TGS1832 SL2.40ch02 4624180 0.0 ch02 2.475 ch02 23.099
TGS2795 SL2.40ch02 19498129 0.0 ch02 2.724
TGS0444 SL2.40ch02 22975044 0.0 ch02 2.887
cLEC-7-P21 SL2.40ch02 12277753 0.0 ch02 2.976
TGS2414 SL2.40ch02 18518616 0.0 ch02 3.239
TGS0291 SL2.40ch02 18716914 0.0 ch02 3.245 ch02 23.356
TGS2853 SL2.40ch02 25076102 0.0 ch02 3.709
tma0077 SL2.40ch02 3154204 0.0 ch02 3.853
tma0292 SL2.40ch02 24020481 0.0 ch02 4.078
tma0256 SL2.40ch02 9586474 0.0 ch02 4.375
tma0121 SL2.40ch02 27429909 0.0 ch02 4.723
TG31 SL2.40ch02 21761787 0.0 ch02 5.706
TES1791 SL2.40ch02 21673332 0.0 ch02 6.416
TES0332 SL2.40ch02 28751677 0.0 ch02 12.045 ch02 31.864
T1117 SL2.40ch02 29791903 0.0 ch02 14.887
TEI0565 SL2.40ch02 30145889 1e-178 ch02 15.771
T888 SL2.40ch02 30418601 1e-88 ch02 16.102
T1238 SL2.40ch02 30528435 1e-132 ch02 16.142
TES0055 SL2.40ch02 30333368 0.0 ch02 16.753
CT140 SL2.40ch02 31137637 0.0 ch02 19.351
TES0782 SL2.40ch02 32071980 0.0 ch02 21.099
T1706 SL2.40ch02 31792379 0.0 ch02 22.189
TGS0571 SL2.40ch02 31196847 0.0 ch02 23.041
T869 SL2.40ch02 31941898 2e-60 ch02 24.052
TES0872 SL2.40ch02 32277521 0.0 ch02 24.917
TEI0387 SL2.40ch02 32183190 0.0 ch02 26.019
SSR40 SL2.40ch02 32277514 1e-131 ch02 26.45
tme0140 SL2.40ch02 32522809 0.0 ch02 28.133
TES0058 SL2.40ch02 32491090 0.0 ch02 28.647
TES1542 SL2.40ch02 32527850 1e-176 ch02 29.177
TES0488 SL2.40ch02 32593864 0.0 ch02 30.621
TGS0785 SL2.40ch02 32835449 0.0 ch02 34.072
TGS0634 SL2.40ch02 32837438 0.0 ch02 35.109
TGS2446 SL2.40ch02 32938342 0.0 ch02 35.311
CT255 SL2.40ch02 32978340 0.0 ch02 35.536
T1768 SL2.40ch02 32900987 2e-82 ch02 35.54
TES0366 SL2.40ch02 32980286 0.0 ch02 36.49
TES1676 SL2.40ch02 33267813 0.0 ch02 37.94
TGS2649 SL2.40ch02 33338844 0.0 ch02 38.813
TES0531 SL2.40ch02 33538185 1e-178 ch02 39.747
TGS2094 SL2.40ch02 33805749 0.0 ch02 40.847
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2300


MarkerDB | Solanum lycopersicum