Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch02

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 2300


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
9189_326 SL2.40ch02 33714430 0.0 ch02 41.867
9189_554 SL2.40ch02 33714430 0.0
9189_88 SL2.40ch02 33714430 0.0
9234_127 SL2.40ch02 29446002 0.0 ch02 39.433 ch02 8.805
9250_295 SL2.40ch02 34251504 0.0
9250_481 SL2.40ch02 34251504 0.0
9328_525 SL2.40ch02 21680717 1e-164 ch02 26.08 ch02 1.531
9328_846 SL2.40ch02 21680717 1e-164
9406_220 SL2.40ch02 28259382 1e-129 ch02 32.112 ch02 3.51
9406_335 SL2.40ch02 28259382 1e-129
9406_433 SL2.40ch02 28259382 1e-129
9518_115 SL2.40ch02 29158781 0.0
9518_176 SL2.40ch02 29158781 0.0
9522_913 SL2.40ch02 6991102 0.0
9526_1244 SL2.40ch02 34968528 1e-132
9526_1501 SL2.40ch02 34968528 1e-132
9561_216 SL2.40ch02 35469464 0.0
9561_508 SL2.40ch02 35469464 0.0
9673_646 SL2.40ch02 38822919 0.0 ch02 96.004 ch02 65.234
96_938 SL2.40ch02 38909420 0.0
9747_610 SL2.40ch02 35931676 0.0
9853_740 SL2.40ch02 35105477 0.0
9878_1039 SL2.40ch02 16033354 0.0
9878_1052 SL2.40ch02 16033354 0.0
C2_At3g26900 SL2.40ch02 49527438 0.0 ch02 157.51
C2_At4g21710 SL2.40ch02 37589611 0.0 ch02 69.774
C2_At4g37130 SL2.40ch02 46432795 0.0 ch02 129.472
C2_At4g37300 SL2.40ch02 48412669 1e-160 ch02 146.225
C2_At5g37260 SL2.40ch02 21311980 0.0 ch02 0.0
C2_At5g40530 SL2.40ch02 48853015 0.0 ch02 154.13
C2_At5g64670 SL2.40ch02 39904662 0.0 ch02 85.534
cLEC-7-H4 SL2.40ch02 42295128 1e-159 ch02 94.482
cLEC-7-P21 SL2.40ch02 12277753 0.0 ch02 2.976
cLEC27M9 SL2.40ch02 35325189 0.0 ch02 53.773
cLEF50C16 SL2.40ch02 39294517 0.0 ch02 81.92
cLES3G11 SL2.40ch02 45807225 0.0 ch02 122.997
cLET-1-A5 SL2.40ch02 41128853 1e-162 ch02 88.296
cLET3K13 SL2.40ch02 38909400 1e-177 ch02 81.847
cLEW-17-M24 SL2.40ch02 36442315 1e-163 ch02 59.745
cLEX-13-I15 SL2.40ch02 40134945 0.0 ch07 83.199
cLEX-2-I9 SL2.40ch02 48455798 0.0 ch02 147.576
cLEX4I9 SL2.40ch02 39395138 1e-113 ch02 81.927
cLPT-1-A21 SL2.40ch02 46184256 1e-148 ch02 125.919
cLPT1E8 SL2.40ch02 35660972 1e-118 ch02 51.822
CT140 SL2.40ch02 31137637 0.0 ch02 19.351
CT255 SL2.40ch02 32978340 0.0 ch02 35.536
P18 SL2.40ch02 42294947 2e-51 ch02 94.392
SSR32 SL2.40ch02 40437454 0.0 ch02 86.632
SSR40 SL2.40ch02 32277514 1e-131 ch02 26.45
SSR478 SL2.40ch02 31944126 3e-60 ch01 2.311
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 2300


MarkerDB | Solanum lycopersicum