Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TES1447 SL2.40ch01 416881 0.0 ch01 0.0
2758_112 SL2.40ch01 322879 1e-153 ch01 0.691 ch01 0.0
TES1019 SL2.40ch01 349938 0.0 ch01 0.0 ch01 1.355
TGS1588 SL2.40ch01 350166 0.0 ch01 1.66
6172_1047 SL2.40ch01 568411 0.0 ch01 3.656
8424_368 SL2.40ch01 663325 0.0 ch01 4.743
TGS1009 SL2.40ch01 739651 0.0 ch01 5.253
2503_859 SL2.40ch01 1097888 0.0 ch01 10.25
1581_673 SL2.40ch01 1123278 0.0 ch01 10.802
TGS0604 SL2.40ch01 1175038 0.0 ch01 11.625
3850_896 SL2.40ch01 1183435 0.0 ch01 13.259
10779_574 SL2.40ch01 1518533 0.0 ch01 17.794 ch01 3.928
7580_248 SL2.40ch01 1558786 0.0 ch01 18.306 ch01 4.3
7553_763 SL2.40ch01 1599533 0.0 ch01 18.808 ch01 5.046
2917_1793 SL2.40ch01 1604128 0.0 ch01 18.808 ch01 5.046
TES1738 SL2.40ch01 1606259 1e-150 ch01 22.973 ch01 18.808
11051_1291 SL2.40ch01 1691253 1e-175 ch01 19.805 ch01 5.792
TES0943 SL2.40ch01 1800965 0.0 ch01 24.131 ch01 20.035
3775_571 SL2.40ch01 1717395 0.0 ch01 20.378 ch01 5.792
2024_303 SL2.40ch01 1800949 0.0 ch01 21.37 ch01 6.539
21382_304 SL2.40ch01 1821156 0.0 ch01 21.37 ch01 6.539
TES0233 SL2.40ch01 2120556 0.0 ch01 24.101 ch01 24.879
TGS0722 SL2.40ch01 2080224 0.0 ch01 25.618
8475_1014 SL2.40ch01 2218535 0.0 ch01 26.339 ch01 13.268
4350_192 SL2.40ch01 2232675 0.0 ch01 26.813 ch01 13.268
TGS0726 SL2.40ch01 2237577 0.0 ch01 26.836
TEI0750 SL2.40ch01 2247801 0.0 ch01 27.281
TGS0377 SL2.40ch01 2527336 0.0 ch01 23.704 ch01 27.511
16888_157 SL2.40ch01 2311366 0.0 ch01 27.847 ch01 14.015
4607_633 SL2.40ch01 2342711 0.0 ch01 27.847 ch01 14.015
8181_419 SL2.40ch01 2391535 0.0 ch01 27.847 ch01 14.015
6454_627 SL2.40ch01 2446261 0.0 ch01 27.847 ch01 14.386
TGS2101 SL2.40ch01 2472414 0.0 ch01 27.847
4681_78 SL2.40ch01 2476036 0.0 ch01 27.847 ch01 14.758
876_147 SL2.40ch01 2477936 0.0 ch01 27.847 ch01 14.758
4927_1481 SL2.40ch01 2656994 0.0 ch01 29.179 ch01 17.812
12695_655 SL2.40ch01 2687540 1e-144 ch01 29.633 ch01 18.184
6053_184 SL2.40ch01 2714462 0.0 ch01 30.099 ch01 20.071
TES0303 SL2.40ch01 2487679 0.0 ch01 32.014
TGS0271 SL2.40ch01 56556415 0.0 ch01 51.462
TGS0241 SL2.40ch01 65989557 0.0 ch01 52.36
TGS0308 SL2.40ch01 66129536 0.0 ch01 53.444
TGS0265 SL2.40ch01 24390723 0.0 ch01 53.845
TGS0685 SL2.40ch01 72127147 0.0 ch01 49.971 ch01 72.185
TES1150 SL2.40ch01 72863172 0.0 ch01 76.559
TEI0950 SL2.40ch01 72898953 1e-135 ch01 79.244
273_877 SL2.40ch01 72901373 0.0 ch01 79.251 ch01 71.326
2837_574 SL2.40ch01 72973060 0.0 ch01 80.232 ch01 71.326
TGS0564 SL2.40ch01 73099018 0.0 ch01 80.292
TGS2456 SL2.40ch01 73048372 0.0 ch01 80.963
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


MarkerDB | Solanum lycopersicum