Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch01

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 3155


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
9659_587 SL2.40ch01 84764940 0.0
9659_599 SL2.40ch01 84764940 0.0
9659_628 SL2.40ch01 84764940 0.0
9659_660 SL2.40ch01 84764940 0.0
9767_450 SL2.40ch01 70326941 0.0
9767_485 SL2.40ch01 70326941 0.0
9951_655 SL2.40ch01 78363225 0.0 ch01 120.817 ch01 96.983
C2_At2g15890 SL2.40ch01 87798059 0.0 ch01 139.59
C2_At2g38730 SL2.40ch01 79365988 0.0 ch01 88.144
C2_At4g00090 SL2.40ch01 76720350 0.0 ch01 61.015
C2_At4g34350 SL2.40ch01 88049246 0.0 ch01 143.667
C2_At4g34700 SL2.40ch01 88872039 0.0 ch01 148.951
CD15 SL2.40ch01 4595698 2e-41 ch01 25.933
cLEC-4-E12 SL2.40ch01 3173430 0.0 ch01 23.592
cLEG-27-F13 SL2.40ch01 75269583 1e-110 ch01 51.977
cLES-5-J1 SL2.40ch01 77081263 1e-113 ch01 68.077
cLET-4-N7 SL2.40ch01 2483296 1e-119 ch01 23.677
cLET-5-J13 SL2.40ch01 75891496 4e-90 ch01 55.777
cLET-7-E12 SL2.40ch01 78738247 1e-143 ch01 83.336
cLET2O9 SL2.40ch01 71027351 0.0 ch01 49.252
cLET3E17 SL2.40ch01 74268319 7e-52 ch01 49.172
cLEY14C14 SL2.40ch01 72509328 0.0 ch01 49.237
cLPT-1-J10 SL2.40ch01 74305503 1e-77 ch08 78.441
cLPT-5-M7 SL2.40ch01 80797223 1e-112 ch01 100.214
cLPT1K12 SL2.40ch01 89169129 0.0 ch04 126.444
cSTA-6-E19 SL2.40ch01 68666291 1e-141 ch01 40.642
CT197 SL2.40ch01 1035020 0.0 ch01 13.993
CT231 SL2.40ch01 72705064 1e-171 ch01 49.176
CT233 SL2.40ch01 303491 0.0 ch01 1.705
CT62 SL2.40ch01 65384898 1e-127 ch01 34.614
cTOB8A5 SL2.40ch01 1469401 1e-178 ch01 23.677
cTOF-17-H17 SL2.40ch01 78436576 0.0 ch01 81.07
P51 SL2.40ch01 77300956 3e-72 ch01 69.202
SSR117 SL2.40ch01 85547966 0.0 ch01 127.192
SSR156 SL2.40ch01 86225274 0.0 ch01 134.046
T1084 SL2.40ch01 84956522 9e-79 ch01 124.624
T1109 SL2.40ch01 85750336 2e-92 ch01 128.453
T1162 SL2.40ch01 76724815 0.0 ch01 62.745
T1208 SL2.40ch01 71659018 0.0 ch01 49.085
T1284 SL2.40ch01 76530907 0.0 ch01 60.361
T1306 SL2.40ch01 90108954 0.0 ch01 153.657
T141 SL2.40ch01 83838850 1e-125 ch01 119.285
T1422 SL2.40ch01 66715960 0.0 ch01 34.648
T1488 SL2.40ch01 81429444 0.0 ch01 103.766
T1557 SL2.40ch01 85830321 1e-86 ch01 128.453
T1619 SL2.40ch01 5783086 1e-144 ch01 36.186
T1627 SL2.40ch01 70296425 1e-154 ch01 49.176
T1629 SL2.40ch01 73569616 2e-97 ch01 49.204
T1650 SL2.40ch01 2657686 1e-162 ch01 23.612
T1662 SL2.40ch01 72181390 0.0 ch01 49.204
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 3155


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