Tomato Marker Database

Tomato genome (SL2.40) list : SL2.40ch00

Order of Tomato markers and tomato gene models

Tomato markers on the Tomato genome (SL2.40)

Total Entries: 269


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(SL2.40)
Evalue Expen2000 AMF2 MMF2
Name Position* Linkage Position Linkage Position Linkage Position
TGS11399 SL2.40ch00 4543871 4e-72
TGS6923 SL2.40ch00 4637841 0.0
TGS12931 SL2.40ch00 4778393 0.0
TGS3329 SL2.40ch00 4946654 2e-99
TGS0679 SL2.40ch00 4997356 0.0
TGS8200 SL2.40ch00 5044639 0.0
TGS4846 SL2.40ch00 5045545 0.0
TGS12651 SL2.40ch00 5049421 0.0
TGS5104 SL2.40ch00 5059057 0.0
TGS10922 SL2.40ch00 5484473 0.0
TGS1018 SL2.40ch00 5786431 0.0
TES6190 SL2.40ch00 5791033 1e-176
TGS9202 SL2.40ch00 5820415 0.0
TES7201 SL2.40ch00 5823173 0.0
TES6267 SL2.40ch00 5829513 0.0
TGS7297 SL2.40ch00 6075947 0.0
TGS7365 SL2.40ch00 6179057 0.0
TGS10962 SL2.40ch00 6561952 0.0
TGS6128 SL2.40ch00 6564431 0.0
TGS4366 SL2.40ch00 6567893 0.31
TES2815 SL2.40ch00 6569989 1e-111
TGS12872 SL2.40ch00 6622538 0.0
TGS2786 SL2.40ch00 6666849 0.0
TES5692 SL2.40ch00 6679645 0.0
6511_681 SL2.40ch00 6692394 0.0 ch02 28.379 ch02 1.919
14663_319 SL2.40ch00 6702373 1e-140
14663_376 SL2.40ch00 6702373 1e-140
14663_387 SL2.40ch00 6702373 1e-140
TES3837 SL2.40ch00 6709394 0.0
8457_1553 SL2.40ch00 6709408 0.0
8457_756 SL2.40ch00 6709408 0.0 ch02 28.134 ch02 1.919
8457_852 SL2.40ch00 6709408 0.0
TES5748 SL2.40ch00 6710672 0.0
TES2901 SL2.40ch00 6749802 0.0
9736_742 SL2.40ch00 6749991 0.0
TGS2225 SL2.40ch00 6814650 0.0
TES7204 SL2.40ch00 6816667 0.0
TGS3620 SL2.40ch00 6894540 0.0
TGS1496 SL2.40ch00 6907550 0.0
TGS3941 SL2.40ch00 6920440 0.0
12902_733 SL2.40ch00 6938281 0.0 ch02 26.524 ch02 1.531
12902_800 SL2.40ch00 6938281 0.0
TGS6516 SL2.40ch00 6994384 0.0
TGS12490 SL2.40ch00 7375998 0.0
TGS9136 SL2.40ch00 8185591 1e-160
TGS7074 SL2.40ch00 8187735 0.0
TGS0353 SL2.40ch00 8419492 0.0 ch02 23.162
TGS6188 SL2.40ch00 8509754 0.0
TES2669 SL2.40ch00 8760869 0.97
TES4433 SL2.40ch00 8772368 0.0
* Best match positions of the marker sequences to the genome databases using blastn without filtering query sequence.

Total Entries: 269


MarkerDB | Solanum lycopersicum