Red clover Marker Database

RCS5969 Information

Marker name RCS5969
Marker category Red_clover_SSR
Primer sequences Fw TGCCAAATGTAATCAATGCAA
Rv CGGTCATCCCACTTATCCAC
EST/Genome sequences BB915030
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG7
Position 62.77
SNP Position
Method
SSR Fragment size 166
Pattern* AAG
Repeat count 18
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5969
Enzyme
Related markers Marker name AP010044, mth2-19g23
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense