Red clover Marker Database

RCS5966 Information

Marker name RCS5966
Marker category Red_clover_SSR
Primer sequences Fw GCGCTCTTTCACCATCTTCT
Rv CATCGCCATCCTTATCGAAT
EST/Genome sequences BB914994
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG5
Position 34.146
SNP Position
Method
SSR Fragment size 166
Pattern* AG
Repeat count 16
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5966
Enzyme
Related markers Marker name AP010646, mth2-10g3
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense