Red clover Marker Database

RCS5901 Information

Marker name RCS5901
Marker category Red_clover_SSR
Primer sequences Fw GAACCGTTGAAAATCGAGGA
Rv GAAGAACCACAACGACGACA
EST/Genome sequences DE244733
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG3
Position 54.708
SNP Position
Method
SSR Fragment size 146
Pattern* AAG
Repeat count 12
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5901
Enzyme
Related markers Marker name AP006391, mth2-113d3
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense