Red clover Marker Database

RCS5846 Information

Marker name RCS5846
Marker category Red_clover_SSR
Primer sequences Fw TTGCCACCCATACCCTTCTA
Rv TTGTTGCTACCACTTGCTGC
EST/Genome sequences DE240744
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG3
Position 68.612
SNP Position
Method
SSR Fragment size 296
Pattern* AAT
Repeat count 25
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5846
Enzyme
Related markers Marker name AP010151, mth2-7h18
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense