Red clover Marker Database

RCS5805 Information

Marker name RCS5805
Marker category Red_clover_SSR
Primer sequences Fw ATAAAGGGCAGAACCAAGCC
Rv CCCCAGTACACCCACACTCT
EST/Genome sequences DE240136
Lines
PIC Value 0.839132
Lines 48
Map
(HR x R130)
Linkage LG4
Position 56.988
SNP Position
Method
SSR Fragment size 242
Pattern* AAAT
Repeat count 24
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5805
Enzyme
Related markers Marker name AP007813, mth2-6b10
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense