Red clover Marker Database

RCS5600 Information

Marker name RCS5600
Marker category Red_clover_SSR
Primer sequences Fw CACCGGGACACACCTAATCT
Rv TCCACATGGTTAAGCAAGCA
EST/Genome sequences DE238774
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG4
Position 71.519
SNP Position
Method
SSR Fragment size 238
Pattern* AC
Repeat count 64
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5600
Enzyme
Related markers Marker name mth2-15m13
Species Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense