Red clover Marker Database

RCS5562 Information

Marker name RCS5562
Marker category Red_clover_SSR
Primer sequences Fw TGGAAACCTTGGTTTTCGTC
Rv TGGAGGAGAAGGAGAAGTGC
EST/Genome sequences DE238387
Lines
PIC Value 0.637596
Lines 48
Map
(HR x R130)
Linkage LG5
Position 87.166
SNP Position
Method
SSR Fragment size 178
Pattern* GGT
Repeat count 13
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5562
Enzyme
Related markers Marker name
Species
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense