Red clover Marker Database

RCS5481 Information

Marker name RCS5481
Marker category Red_clover_SSR
Primer sequences Fw CCCCATAGAACCATACCCAG
Rv TCTCATCCTCATTTCCAACTCA
EST/Genome sequences DE237890
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG6
Position 56.674
SNP Position
Method
SSR Fragment size 294
Pattern* AAAC
Repeat count 18
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5481
Enzyme
Related markers Marker name mth2-9m5
Species Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense