Red clover Marker Database

RCS5353 Information

Marker name RCS5353
Marker category Red_clover_SSR
Primer sequences Fw ACTAACCCAAACCCCAAAGG
Rv CCGTTTAAGAATGGGTCGAA
EST/Genome sequences BB912799
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG4
Position 63.195
SNP Position
Method
SSR Fragment size 253
Pattern* AATT
Repeat count 24
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5353
Enzyme
Related markers Marker name AP004963, mte1-41j24
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense