Red clover Marker Database

RCS5330 Information

Marker name RCS5330
Marker category Red_clover_SSR
Primer sequences Fw TGGAAAATGTTGCACAAACAA
Rv AGTTAAGCGAGCGAAATCCA
EST/Genome sequences BB913363
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG4
Position 27.81
SNP Position
Method
SSR Fragment size 212
Pattern* AT
Repeat count 16
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5330
Enzyme
Related markers Marker name AP007927, mth2-133o10
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense