Red clover Marker Database

RCS5254 Information

Marker name RCS5254
Marker category Red_clover_SSR
Primer sequences Fw CTCTTCCCGCTCTTTTTCCT
Rv TGTCTAACCAATGGCGATGA
EST/Genome sequences BB912773
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG3
Position 67.877
SNP Position
Method
SSR Fragment size 192
Pattern* AAG
Repeat count 16
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5254
Enzyme
Related markers Marker name AP010383, mth2-36n9
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense