Red clover Marker Database

RCS5245 Information

Marker name RCS5245
Marker category Red_clover_SSR
Primer sequences Fw CATGTCACAAGTTTCCACCG
Rv TGGAAGAAAGAAGCACATGG
EST/Genome sequences BB912687
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG3
Position 28.225
SNP Position
Method
SSR Fragment size 212
Pattern* AAT
Repeat count 33
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5245
Enzyme
Related markers Marker name AP010314, mth2-69d7
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense