Red clover Marker Database

RCS5238 Information

Marker name RCS5238
Marker category Red_clover_SSR
Primer sequences Fw GAAAGTGTAAAAGCAGGCCG
Rv TTCTGAACCTTCTCCTCCGA
EST/Genome sequences BB912642
Lines
PIC Value 0.560092
Lines 48
Map
(HR x R130)
Linkage LG2
Position 20.829
SNP Position
Method
SSR Fragment size 174
Pattern* AAG
Repeat count 21
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5238
Enzyme
Related markers Marker name mth2-175h23
Species Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense