Red clover Marker Database

RCS5154 Information

Marker name RCS5154
Marker category Red_clover_SSR
Primer sequences Fw CAAAATTCTTCAGCTTCATCCA
Rv ACATTGTGGCGTGTACCAGA
EST/Genome sequences BB912034
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG3
Position 31.079
SNP Position
Method
SSR Fragment size 131
Pattern* GGT
Repeat count 17
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5154
Enzyme
Related markers Marker name AP007904, mth2-20m15
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense